Anchorpoints
- Gene id
- PT13G03130
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT05G04480 | No description available. | Chr05 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL6G28280 | No description available. | scaffold_6 | - | View |
AL3G04850 | No description available. | scaffold_3 | - | View |
AL1G51620 | No description available. | scaffold_1 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G27200 | acyl carrier protein 5 (ACP5); FUNCTIONS IN: acyl carrier activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: acyl carrier protein 1 (TAIR:AT3G05020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). encodes an acyl carrier protein acyl carrier protein 5 | 5 | + | View |
AT1G54580 | acyl carrier protein 2 (ACP2); FUNCTIONS IN: acyl carrier activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: acyl carrier protein 3 (TAIR:AT1G54630.1); Has 6585 Blast hits to 6585 proteins in 2202 species: Archae - 0; Bacteria - 4416; Metazoa - 36; Fungi - 108; Plants - 352; Viruses - 2; Other Eukaryotes - 1671 (source: NCBI BLink). acyl carrier protein 2 encodes an acyl carrier protein expressed in leaves, roots, and dry seeds. Gene expression is not regulated by light but downregulated by starvation and upregulated by increased level of exogenous sucrose. | 1 | + | View |
AT3G05020 | acyl carrier protein 1 encodes an acyl carrier protein expressed in leaves, roots, and dry seeds. Protein is not regulated by light. acyl carrier protein 1 (ACP1); FUNCTIONS IN: acyl carrier activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein-like (InterPro:IPR009081), Acyl carrier protein (ACP) (InterPro:IPR003231), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: acyl carrier protein 5 (TAIR:AT5G27200.1); Has 7070 Blast hits to 7070 proteins in 2342 species: Archae - 0; Bacteria - 4637; Metazoa - 167; Fungi - 132; Plants - 369; Viruses - 2; Other Eukaryotes - 1763 (source: NCBI BLink). | 3 | - | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00057G01330 | No description available. | scaffold00057 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR09G05230 | No description available. | A09 | + | View |
BR05G35250 | Acyl carrier protein SF2, chloroplastic | A05 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV0G73480 | No description available. | 0033.scaffold00127 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL02G16520 | No description available. | Chr2 | + | View |
CL06G05220 | No description available. | Chr6 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00003G04620 | No description available. | CM3.5_scaffold00003 | + | View |
CM00047G02420 | No description available. | CM3.5_scaffold00047 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00016G01070 | No description available. | supercontig_16 | - | View |
CP00117G00270 | No description available. | supercontig_117 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_006G24540 | No description available. | scaffold_6 | - | View |
CRU_003G04100 | No description available. | scaffold_3 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00011G02440 | No description available. | scaffold00011 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0002G10360 | No description available. | scaffold_2 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV4G11640 | Acyl carrier protein 1, chloroplastic (ACP 1), Precursor (putative) | LG4 | - | View |
FV0G24110 | Acyl carrier protein 1, chloroplastic (ACP 1), Precursor (putative) | scf0513168 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM10G30000 | No description available. | Gm10 | + | View |
GM20G37385 | No description available. | Gm20 | - | View |
GM19G42860 | No description available. | Gm19 | + | View |
GM03G40250 | No description available. | Gm03 | + | View |
GM15G10520 | No description available. | Gm15 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR13G11690 | No description available. | Chr13 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ5G024820 | No description available. | chr5 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD16G012860 | No description available. | 16 | + | View |
MD13G016660 | No description available. | 13 | + | View |
MD12G022970 | No description available. | 12 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME09365G00140 | No description available. | scaffold09365 | - | View |
ME04285G00240 | No description available. | scaffold04285 | - | View |
ME01551G03140 | No description available. | scaffold01551 | - | View |
ME03614G04050 | No description available. | scaffold03614 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT1G081920 | acyl carrier protein | chr1 | - | View |
MT4G118750 | phosphopantetheine attachment site protein | chr4 | - | View |
MT2G020360 | acyl carrier protein | chr2 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_006G33940 | No description available. | scaffold_6 | - | View |
PPE_001G13530 | No description available. | scaffold_1 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29726G00920 | No description available. | 29726 | - | View |
RC30128G00730 | No description available. | 30128 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0004G27820 | No description available. | scaffold_4 | - | View |
TC0005G25260 | No description available. | scaffold_5 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP3G03850 | similar to AT3G05020|ACP1 (acyl carrier protein 1) | ch3-1 | - | View |
TP2G20440 | similar to AT5G27200|ACP5 (acyl carrier protein 5) | ch2-4 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV14G04370 | name=GSVIVG01021969001; | chr14 | + | View |
VV05G03570 | name=GSVIVG01017817001; | chr5 | + | View |