Anchorpoints

Gene id
PT12G05570
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT04G09940No description available.Chr04+View
PT15G04630No description available.Chr15+View
PT17G11530No description available.Chr17-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G22720No description available.scaffold_2+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G18400BR enhanced expression 1 BR enhanced expression 1 (BEE1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BR enhanced expression 3 (TAIR:AT1G73830.1); Has 2046 Blast hits to 2038 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 35; Plants - 1999; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).1+View
AT1G73830BR enhanced expression 3 (BEE3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BR enhanced expression 1 (TAIR:AT1G18400.1); Has 2141 Blast hits to 2133 proteins in 100 species: Archae - 0; Bacteria - 4; Metazoa - 8; Fungi - 37; Plants - 2087; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). BR enhanced expression 31+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00079G00550No description available.scaffold00079-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G13060No description available.A06+View
BR02G22340No description available.A02+View
BR07G29580No description available.A07+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL06G15320No description available.Chr6+View
CL05G24450No description available.Chr5+View
CL04G10990No description available.Chr4+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00030G02440No description available.CM3.5_scaffold00030-View
CM00001G01810No description available.CM3.5_scaffold00001-View
CM00016G05100No description available.CM3.5_scaffold00016-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00065G00440No description available.supercontig_65-View
CP00003G04940No description available.supercontig_3+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G19430No description available.scaffold_2+View
CRU_001G17240No description available.scaffold_1+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00071G00660No description available.scaffold00071-View
CS00008G00670No description available.scaffold00008+View
CS00090G00200No description available.scaffold00090-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G18460No description available.scaffold_11-View
EG0002G06320No description available.scaffold_2-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G01370Transcription factor bHLH75 (bHLH 75) (similar to)scf0513158+View
FV5G35920Transcription factor BEE 3 (bHLH 50) (probable)LG5+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM07G10311No description available.Gm07-View
GM08G04661No description available.Gm08-View
GM09G31580No description available.Gm09+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR06G19450No description available.Chr06+View
GR06G06040No description available.Chr06-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ4G049640No description available.chr4-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD14G021330No description available.14-View
MD13G002550No description available.13+View
MD16G001500No description available.16+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03264G00820No description available.scaffold03264+View
ME06871G00640No description available.scaffold06871+View
ME03604G00640No description available.scaffold03604+View
ME04043G00840No description available.scaffold04043+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT6G084120transcription factorchr6+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G22470No description available.scaffold_5-View
PPE_001G32270No description available.scaffold_1-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30066G00090No description available.30066-View
RC29974G00130No description available.29974-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G007300Transcription factor (AHRD V1 *-*- D6MKM4_9ASPA)%3B contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-bindingch04-View
SL03G119390Transcription factor (AHRD V1 *-** D6MKM4_9ASPA)%3B contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-bindingch03+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G032930Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-bindingchr03+View
ST12G018370Transcription factor (AHRD V1 *-*- D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-bindingchr12-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G13980No description available.scaffold_4+View
TC0003G03520No description available.scaffold_3-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G16350similar to AT1G18400|BEE1 (BR Enhanced Expression 1)ch1-1+View
TP5G29030similar to AT1G73830|BEE3 (BR ENHANCED EXPRESSION 3)ch5-7+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV14G08020name=GSVIVG01031020001;chr14+View
VV01G07580name=GSVIVG01011873001;chr1-View
VV17G06080name=GSVIVG01008299001;chr17+View


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Gene id
Species
Description
Chromosome
Strand