Anchorpoints
- Gene id
- PT12G05570
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT04G09940 | No description available. | Chr04 | + | View |
PT15G04630 | No description available. | Chr15 | + | View |
PT17G11530 | No description available. | Chr17 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL2G22720 | No description available. | scaffold_2 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G18400 | BR enhanced expression 1 BR enhanced expression 1 (BEE1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BR enhanced expression 3 (TAIR:AT1G73830.1); Has 2046 Blast hits to 2038 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 35; Plants - 1999; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | 1 | + | View |
AT1G73830 | BR enhanced expression 3 (BEE3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BR enhanced expression 1 (TAIR:AT1G18400.1); Has 2141 Blast hits to 2133 proteins in 100 species: Archae - 0; Bacteria - 4; Metazoa - 8; Fungi - 37; Plants - 2087; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). BR enhanced expression 3 | 1 | + | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00079G00550 | No description available. | scaffold00079 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR06G13060 | No description available. | A06 | + | View |
BR02G22340 | No description available. | A02 | + | View |
BR07G29580 | No description available. | A07 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL06G15320 | No description available. | Chr6 | + | View |
CL05G24450 | No description available. | Chr5 | + | View |
CL04G10990 | No description available. | Chr4 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00030G02440 | No description available. | CM3.5_scaffold00030 | - | View |
CM00001G01810 | No description available. | CM3.5_scaffold00001 | - | View |
CM00016G05100 | No description available. | CM3.5_scaffold00016 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00065G00440 | No description available. | supercontig_65 | - | View |
CP00003G04940 | No description available. | supercontig_3 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_002G19430 | No description available. | scaffold_2 | + | View |
CRU_001G17240 | No description available. | scaffold_1 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00071G00660 | No description available. | scaffold00071 | - | View |
CS00008G00670 | No description available. | scaffold00008 | + | View |
CS00090G00200 | No description available. | scaffold00090 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0011G18460 | No description available. | scaffold_11 | - | View |
EG0002G06320 | No description available. | scaffold_2 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV0G01370 | Transcription factor bHLH75 (bHLH 75) (similar to) | scf0513158 | + | View |
FV5G35920 | Transcription factor BEE 3 (bHLH 50) (probable) | LG5 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM07G10311 | No description available. | Gm07 | - | View |
GM08G04661 | No description available. | Gm08 | - | View |
GM09G31580 | No description available. | Gm09 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR06G19450 | No description available. | Chr06 | + | View |
GR06G06040 | No description available. | Chr06 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ4G049640 | No description available. | chr4 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD14G021330 | No description available. | 14 | - | View |
MD13G002550 | No description available. | 13 | + | View |
MD16G001500 | No description available. | 16 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME03264G00820 | No description available. | scaffold03264 | + | View |
ME06871G00640 | No description available. | scaffold06871 | + | View |
ME03604G00640 | No description available. | scaffold03604 | + | View |
ME04043G00840 | No description available. | scaffold04043 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT6G084120 | transcription factor | chr6 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_005G22470 | No description available. | scaffold_5 | - | View |
PPE_001G32270 | No description available. | scaffold_1 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30066G00090 | No description available. | 30066 | - | View |
RC29974G00130 | No description available. | 29974 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL04G007300 | Transcription factor (AHRD V1 *-*- D6MKM4_9ASPA)%3B contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding | ch04 | - | View |
SL03G119390 | Transcription factor (AHRD V1 *-** D6MKM4_9ASPA)%3B contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding | ch03 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST03G032930 | Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding | chr03 | + | View |
ST12G018370 | Transcription factor (AHRD V1 *-*- D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding | chr12 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0004G13980 | No description available. | scaffold_4 | + | View |
TC0003G03520 | No description available. | scaffold_3 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G16350 | similar to AT1G18400|BEE1 (BR Enhanced Expression 1) | ch1-1 | + | View |
TP5G29030 | similar to AT1G73830|BEE3 (BR ENHANCED EXPRESSION 3) | ch5-7 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV14G08020 | name=GSVIVG01031020001; | chr14 | + | View |
VV01G07580 | name=GSVIVG01011873001; | chr1 | - | View |
VV17G06080 | name=GSVIVG01008299001; | chr17 | + | View |