Anchorpoints

Gene id
PT12G05120
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT15G04310No description available.Chr15+View
PT08G12580No description available.Chr08-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G19690No description available.scaffold_3-View
AL1G42390No description available.scaffold_1-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G487002-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G43660.1); Has 364 Blast hits to 363 proteins in 61 species: Archae - 0; Bacteria - 16; Metazoa - 230; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein1-View
AT3G182102-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G22950.1); Has 407 Blast hits to 406 proteins in 80 species: Archae - 0; Bacteria - 16; Metazoa - 257; Fungi - 0; Plants - 94; Viruses - 3; Other Eukaryotes - 37 (source: NCBI BLink). 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein3-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G25470No description available.A05+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G05810No description available.Chr1-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00003G04470No description available.supercontig_3+View
CP00065G00820No description available.supercontig_65-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G17170No description available.scaffold_3-View
CRU_001G35890No description available.scaffold_1-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00008G00030No description available.scaffold00008+View
CS00044G00020No description available.scaffold00044+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G23370No description available.scaffold_2-View
EG0011G18570No description available.scaffold_11-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G17220Uncharacterized PKHD-type hydroxylase At1g22950 (similar to)LG5+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM09G31060No description available.Gm09+View
GM10G41460No description available.Gm10+View
GM20G25770No description available.Gm20-View
GM07G11180No description available.Gm07-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ4G050840No description available.chr4-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD13G002150No description available.13+View
MD16G001010No description available.16+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03264G00370No description available.scaffold03264+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G106610oxidoreductase C putativechr8-View
MT6G0818602OG-Fe(II) oxygenase family oxidoreductasechr6+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G22880No description available.scaffold_5-View
PPE_001G32880No description available.scaffold_1-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29747G00240No description available.29747+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G0086102-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 (AHRD V1 *--- OGFD2_XENTR)%3B contains Interpro domain(s) IPR006620 Prolyl 4-hydroxylase%2C alpha subunitch05+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST05G0091202-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 (AHRD V1 *--- OGFD2_XENTR); contains Interpro domain(s) IPR006620 Prolyl 4-hydroxylase, alpha subunitchr05-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G16320similar to AT3G18210|oxidoreductase, 2OG-Fe(II) oxygenase family proteinch3-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G07070name=GSVIVG01011812001;chr1-View
VV17G06530name=GSVIVG01008354001;chr17+View


Download

Gene id
Species
Description
Chromosome
Strand