Anchorpoints

Gene id
PT10G21810
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G02150No description available.scaffold_6-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G03040IQ-domain 2 (iqd2); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 1 (TAIR:AT3G09710.1); Has 1155 Blast hits to 1120 proteins in 81 species: Archae - 0; Bacteria - 2; Metazoa - 71; Fungi - 33; Plants - 987; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). IQ-domain 25-View
AT3G09710IQ-domain 1 Ca(2+)-dependent calmodulin-binding protein. Targeted to the nucleus. Involved in glucosinolate metabolism in response to biotic challenge. Expressed in vascular tissue. IQ-domain 1 (IQD1); FUNCTIONS IN: calmodulin binding; INVOLVED IN: glucosinolate biosynthetic process, defense response; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 2 (TAIR:AT5G03040.3).3-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL09G20780No description available.Chr9-View
CL10G18490No description available.Chr10+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00079G00740No description available.CM3.5_scaffold00079-View
CM00011G02470No description available.CM3.5_scaffold00011-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00053G00290No description available.supercontig_53+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G01790No description available.scaffold_6-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00270G00290No description available.scaffold00270+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0001G09480No description available.scaffold_1-View
EG0010G09920No description available.scaffold_10+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G24430Protein IQ-DOMAIN 1 (probable)LG7+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM13G20070No description available.Gm13-View
GM10G05720No description available.Gm10-View
GM20G31810No description available.Gm20-View
GM03G33560No description available.Gm03-View
GM17G23770No description available.Gm17-View
GM19G36270No description available.Gm19-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR02G24970No description available.Chr02+View
GR09G31490No description available.Chr09+View
GR06G16840No description available.Chr06-View
GR12G09390No description available.Chr12+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G063850No description available.chr1-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME12004G00660No description available.scaffold12004+View
ME11236G00080No description available.scaffold11236+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G095740IQ calmodulin-binding motif proteinchr1+View
MT7G100790IQ calmodulin-binding motif proteinchr7-View
MT6G033415IQ calmodulin-binding motif proteinchr6-View
MT1G066800IQ calmodulin-binding motif proteinchr1+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS05G03190IQ calmodulin-binding motif domain containing protein, expressed5+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G21060No description available.scaffold_2+View
PPE_006G24800No description available.scaffold_6-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29740G00150No description available.29740-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G084280Calmodulin-binding protein (AHRD V1 *--* C5HYF8_BRARP)%3B contains Interpro domain(s) IPR000048 IQ calmodulin-binding regionch10+View
SL04G050050Calmodulin-binding protein (AHRD V1 **-* C5HYF8_BRARP)%3B contains Interpro domain(s) IPR000048 IQ calmodulin-binding regionch04-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST10G024720Calmodulin-binding protein (AHRD V1 *--* C5HYF8_BRARP); contains Interpro domain(s) IPR000048 IQ calmodulin-binding regionchr10-View
ST04G019040Calmodulin-binding protein (AHRD V1 **-* C5HYF8_BRARP); contains Interpro domain(s) IPR000048 IQ calmodulin-binding regionchr04-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0010G06540No description available.scaffold_10r-View
TC0005G05260No description available.scaffold_5-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G39650similar to AT5G03040|iqd2 (IQ-domain 2)ch6-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV13G03520name=GSVIVG01016320001;chr13-View
VV08G02490name=GSVIVG01025635001;chr8+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM06G03880No description available.6-View


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Gene id
Species
Description
Chromosome
Strand