Anchorpoints

Gene id
PT08G11730
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT17G11240No description available.Chr17+View
PT04G10250No description available.Chr04-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL5G04220No description available.scaffold_5+View
AL1G13920No description available.scaffold_1+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G25760encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is induced during senescence, a process that involves jasmonic acid signalling pathway. allene oxide cyclase 1 allene oxide cyclase 1 (AOC1); FUNCTIONS IN: allene-oxide cyclase activity; INVOLVED IN: response to desiccation, response to water deprivation, jasmonic acid biosynthetic process, peptidyl-cysteine S-nitrosylation; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: pollen tube; EXPRESSED DURING: 4 leaf senescence stage; CONTAINS InterPro DOMAIN/s: Allene oxide cyclase (InterPro:IPR009410); BEST Arabidopsis thaliana protein match is: allene oxide cyclase 2 (TAIR:AT3G25770.1); Has 202 Blast hits to 202 proteins in 32 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 198; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3+View
AT1G13280allene oxide cyclase 4 Encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is reduced during senescence, a process that involves jasmonic acid signalling pathway. allene oxide cyclase 4 (AOC4); FUNCTIONS IN: allene-oxide cyclase activity; INVOLVED IN: jasmonic acid biosynthetic process; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Allene oxide cyclase (InterPro:IPR009410); BEST Arabidopsis thaliana protein match is: allene oxide cyclase 3 (TAIR:AT3G25780.1); Has 204 Blast hits to 204 proteins in 33 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G20900No description available.A09-View
BR06G34040No description available.A06-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV2G06840No description available.Bvchr2.sca001+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G03270No description available.scaffold_5+View
CRU_001G12400No description available.scaffold_1+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00019G00690No description available.scaffold00019-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G02350Allene oxide cyclase 3, chloroplastic, Precursor (putative)scf0513158-View
FV6G40960Allene oxide cyclase 4, chloroplastic, Precursor (similar to)LG6-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM02G11020No description available.Gm02-View
GM01G22160No description available.Gm01-View
GM08G28750No description available.Gm08+View
GM18G51600No description available.Gm18+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G18560No description available.Chr08-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G018820No description available.chr2-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD16G001980No description available.16-View
MD13G002960No description available.13-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME08359G00480No description available.scaffold08359-View
ME06871G00870No description available.scaffold06871-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G053950allene oxide cyclasechr5+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G31610No description available.scaffold_1+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29738G00540No description available.29738+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G085730Allene oxide cyclase (AHRD V1 **** Q9LEG5_SOLLC)%3B contains Interpro domain(s) IPR009410 Allene oxide cyclasech02+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G028860Allene oxide cyclase (AHRD V1 **** Q8H1X5_SOLTU); contains Interpro domain(s) IPR009410 Allene oxide cyclasechr02+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G14400No description available.scaffold_4-View
TC0002G35800No description available.scaffold_2-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G15000similar to AT3G25770|AOC2 (ALLENE OXIDE CYCLASE 2)ch2-4+View
TP1G11790similar to AT1G13280|AOC4 (ALLENE OXIDE CYCLASE 4)ch1-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G08160name=GSVIVG01011944001;chr1+View
VV14G15320name=GSVIVG01036445001;chr14-View


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Gene id
Species
Description
Chromosome
Strand