Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- PT07G00340
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT14G00040 | No description available. | Chr14 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL1G17580 | No description available. | scaffold_1 | + | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G79000 | Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides, suggesting that HAC1, HAC5, and HAC12 can acetylate any of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation. histone acetyltransferase of the CBP family 1 (HAC1); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 12 (TAIR:AT1G16710.1). histone acetyltransferase of the CBP family 1 | 1 | - | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV0G12780 | No description available. | Bvchr7_un.sca005 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_002G24460 | No description available. | scaffold_2 | - | View |
| CRU_001G15710 | No description available. | scaffold_1 | + | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00026G01920 | No description available. | scaffold00026 | - | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV0G17410 | Histone acetyltransferase HAC1 (similar to) | scf0513160 | + | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR09G12160 | No description available. | Chr09 | - | View |
| GR11G00140 | No description available. | Chr11 | + | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT4G005050 | histone acetyltransferase HAC-like protein C putative | chr4 | + | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_003G01520 | No description available. | scaffold_3 | - | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC30169G00040 | No description available. | 30169 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0006G04830 | No description available. | scaffold_6 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP5G34050 | similar to AT1G79000|HAC1 (HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1) | ch5-7 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV09G08790 | name=GSVIVG01029443001; | chr9 | - | View |