Anchorpoints
- Gene id
- PT04G11480
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT17G10010 | No description available. | Chr17 | - | View |
PT10G14030 | No description available. | Chr10 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL6G15620 | No description available. | scaffold_6 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G15790 | RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G02290.1); Has 5281 Blast hits to 5274 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 1803; Fungi - 302; Plants - 2328; Viruses - 9; Other Eukaryotes - 839 (source: NCBI BLink). | 5 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR10G19410 | No description available. | A10 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV2G08450 | No description available. | Bvchr2.sca001 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_003G01320 | No description available. | scaffold_3 | + | View |
CRU_006G13610 | No description available. | scaffold_6 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00019G01750 | No description available. | scaffold00019 | + | View |
CS00015G00410 | No description available. | scaffold00015 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0009G17340 | No description available. | scaffold_9 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV6G42010 | E3 ubiquitin-protein ligase At3g02290 (similar to) | LG6 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM19G04340 | No description available. | Gm19 | - | View |
GM13G06840 | No description available. | Gm13 | - | View |
GM08G27730 | No description available. | Gm08 | - | View |
GM18G50945 | No description available. | Gm18 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR01G20710 | No description available. | Chr01 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME04043G01700 | No description available. | scaffold04043 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT7G016840 | RING-finger ubiquitin ligase | chr7 | + | View |
MT6G015980 | RING-finger ubiquitin ligase | chr6 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_003G22810 | No description available. | scaffold_3 | + | View |
PPE_001G30230 | No description available. | scaffold_1 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL02G089240 | Zinc finger family protein (AHRD V1 ***- D7KZF4_ARALY)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch02 | - | View |
SL05G012010 | RING-H2 finger protein (Fragment) (AHRD V1 *-*- Q7X9M1_WHEAT)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch05 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST02G033640 | Zinc finger family protein (AHRD V1 **-* D7KZF4_ARALY); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr02 | + | View |
ST05G006020 | E3 ubiquitin-protein ligase At3g02290 (AHRD V1 *--- RING3_ARATH); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr05 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0004G11080 | No description available. | scaffold_4 | - | View |
TC0002G32500 | No description available. | scaffold_2 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP5G24180 | similar to AT5G38895|zinc finger (C3HC4-type RING finger) family protein | ch5-6 | + | View |
TP6G28330 | similar to AT5G15790|zinc finger (C3HC4-type RING finger) family protein | ch6-6 | - | View |
TP3G01350 | similar to AT3G02290|zinc finger (C3HC4-type RING finger) family protein | ch3-1 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV14G16070 | name=GSVIVG01036545001; | chr14 | + | View |
VV01G10770 | name=GSVIVG01012252001; | chr1 | + | View |