Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- PT04G09350
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT08G12740 | No description available. | Chr08 | - | View |
| PT10G11560 | No description available. | Chr10 | + | View |
| PT17G12230 | No description available. | Chr17 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL7G40780 | No description available. | scaffold_7 | - | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G38070 | RING/FYVE/PHD zinc finger superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT2G01275.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). RING/FYVE/PHD zinc finger superfamily protein | 5 | + | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV2G07780 | No description available. | Bvchr2.sca001 | - | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00005G02630 | No description available. | CM3.5_scaffold00005 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00116G00080 | No description available. | supercontig_116 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_005G11620 | No description available. | scaffold_5 | + | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00042G00430 | No description available. | scaffold00042 | + | View |
| CS00034G00880 | No description available. | scaffold00034 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0007G16830 | No description available. | scaffold_7 | + | View |
| EG0010G13470 | No description available. | scaffold_10 | - | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV0G06300 | E3 ubiquitin-protein ligase MARCH2 (MARCH-II) (probable) | scf0513158 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM02G10030 | No description available. | Gm02 | - | View |
| GM18G52931 | No description available. | Gm18 | + | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR01G08490 | No description available. | Chr01 | - | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD16G000520 | No description available. | 16 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME04043G00430 | No description available. | scaffold04043 | + | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT7G082950 | RING/FYVE/PHD zinc finger protein | chr7 | - | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_003G12550 | No description available. | scaffold_3 | - | View |
| PPE_001G33130 | No description available. | scaffold_1 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL02G091230 | E3 ubiquitin-protein ligase MARCH2 (AHRD V1 *--* B5XFT2_SALSA)%3B contains Interpro domain(s) IPR011016 Zinc finger%2C RING-CH-type | ch02 | - | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST05G009340 | E3 ubiquitin-protein ligase MARCH3 (AHRD V1 *--- B5X3M1_SALSA); contains Interpro domain(s) IPR011016 Zinc finger, RING-CH-type | chr05 | + | View |
| ST02G029780 | E3 ubiquitin-protein ligase MARCH3 (AHRD V1 ***- E2B974_9HYME); contains Interpro domain(s) IPR011016 Zinc finger, RING-CH-type | chr02 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0002G27780 | No description available. | scaffold_2 | - | View |
| TC0004G13000 | No description available. | scaffold_4 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP7G04010 | similar to AT5G38070|zinc finger (C3HC4-type RING finger) family protein | ch7-1 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV01G06870 | name=GSVIVG01011789001; | chr1 | + | View |
| VV14G07330 | name=GSVIVG01030910001; | chr14 | + | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM08G02630 | No description available. | 8 | - | View |