Anchorpoints
- Gene id
- PT04G05590
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL4G19320 | No description available. | scaffold_4 | - | View |
AL8G02490 | No description available. | scaffold_8 | - | View |
AL1G29980 | No description available. | scaffold_1 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G34080 | Cysteine proteinases superfamily protein Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G29090.1); Has 1344 Blast hits to 1324 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1342; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 2 | - | View |
AT1G29080 | Papain family cysteine protease Papain family cysteine protease; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G29090.1); Has 7819 Blast hits to 7758 proteins in 724 species: Archae - 63; Bacteria - 249; Metazoa - 3289; Fungi - 4; Plants - 1890; Viruses - 133; Other Eukaryotes - 2191 (source: NCBI BLink). | 1 | - | View |
AT1G06260 | Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT3G19390.1); Has 7835 Blast hits to 7772 proteins in 746 species: Archae - 66; Bacteria - 269; Metazoa - 3267; Fungi - 4; Plants - 1872; Viruses - 136; Other Eukaryotes - 2221 (source: NCBI BLink). Cysteine proteinases superfamily protein | 1 | + | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00021G00100 | No description available. | scaffold00021 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR05G10400 | No description available. | A05 | + | View |
BR07G06650 | No description available. | A07 | + | View |
BR02G28250 | No description available. | A02 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV8G10910 | No description available. | Bvchr8.sca001 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00007G00540 | No description available. | supercontig_7 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G26160 | No description available. | scaffold_1 | - | View |
CRU_001G05290 | No description available. | scaffold_1 | + | View |
CRU_008G02000 | No description available. | scaffold_8 | - | View |
CRU_004G15210 | No description available. | scaffold_4 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00041G00070 | No description available. | scaffold00041 | - | View |
CS00007G00910 | No description available. | scaffold00007 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0011G09260 | No description available. | scaffold_11 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV6G22680 | Fruit bromelain, Precursor (probable) | LG6 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM15G08840 | No description available. | Gm15 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR10G15880 | No description available. | Chr10 | - | View |
GR11G03420 | No description available. | Chr11 | + | View |
GR09G16320 | No description available. | Chr09 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ6G025790 | No description available. | chr6 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD10G022580 | No description available. | 10 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT2G015840 | papain family cysteine protease | chr2 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_003G11220 | No description available. | scaffold_3 | - | View |
PPE_004G05680 | No description available. | scaffold_4 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL02G076690 | Cathepsin B-like cysteine proteinase (AHRD V1 **-* CYSP_SCHMA)%3B contains Interpro domain(s) IPR013128 Peptidase C1A%2C papain | ch02 | - | View |
SL03G006200 | Cathepsin B-like cysteine proteinase 5 (AHRD V1 **-* CPR5_CAEEL)%3B contains Interpro domain(s) IPR013128 Peptidase C1A%2C papain | ch03 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G14490 | No description available. | scaffold_1 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G05070 | similar to AT1G06260|cysteine proteinase, putative | ch1-1 | + | View |
TP4G16430 | similar to AT2G34080|cysteine proteinase, putative | ch4-6 | - | View |
TP2G10810 | similar to AT5G45890|SAG12 (SENESCENCE-ASSOCIATED GENE 12) | ch2-4 | + | View |
TP1G25020 | similar to AT1G29080|peptidase C1A papain family protein | ch1-1 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV12G02790 | name=GSVIVG01020698001; | chr12 | + | View |
VV10G02000 | name=GSVIVG01021194001; | chr10 | - | View |