Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- PT03G22030
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT19G03600 | No description available. | Chr19 | + | View |
| PT01G00460 | No description available. | Chr01 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL6G20060 | No description available. | scaffold_6 | - | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G19770 | tubulin alpha-3 (TUA3); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: cellular response to gravity; LOCATED IN: tubulin complex, cytosol, cell wall, plasma membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-5 (TAIR:AT5G19780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). tubulin alpha-3 tubulin 3 | 5 | - | View |
Amborella trichopoda
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ATR_00068G00440 | No description available. | scaffold00068 | - | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV4G11350 | No description available. | Bvchr4.sca001 | + | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL02G24370 | No description available. | Chr2 | - | View |
| CL03G11490 | No description available. | Chr3 | + | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00022G05540 | No description available. | CM3.5_scaffold00022 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00119G00500 | No description available. | supercontig_119 | + | View |
| CP00051G01370 | No description available. | supercontig_51 | + | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00117G00220 | No description available. | scaffold00117 | - | View |
| CS00123G00130 | No description available. | scaffold00123 | - | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0001G17550 | No description available. | scaffold_1 | + | View |
| EG0002G30080 | No description available. | scaffold_2 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV3G37350 | Tubulin alpha-6 chain (similar to) | LG3 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM19G28990 | No description available. | Gm19 | + | View |
| GM16G04420 | No description available. | Gm16 | - | View |
| GM16G27030 | No description available. | Gm16 | + | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR07G26100 | No description available. | Chr07 | - | View |
| GR13G24460 | No description available. | Chr13 | - | View |
| GR13G11510 | No description available. | Chr13 | - | View |
Lotus japonicus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| LJ4G041450 | No description available. | chr4 | - | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD11G000330 | No description available. | 11 | + | View |
| MD03G000850 | No description available. | 3 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME06582G01240 | No description available. | scaffold06582 | + | View |
| ME03614G02220 | No description available. | scaffold03614 | - | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT7G085800 | tubulin beta-1 chain | chr7 | + | View |
| MT8G085980 | tubulin beta-1 chain | chr8 | - | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_006G01500 | No description available. | scaffold_6 | - | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC29950G00040 | No description available. | 29950 | - | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST12G032790 | Tubulin alpha-4 chain (AHRD V1 ***- A9P7T6_POPTR); contains Interpro domain(s) IPR002452 Alpha tubulin | chr12 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0009G20360 | No description available. | scaffold_9 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP6G24620 | similar to AT5G19780|TUA5 | ch6-6 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV08G08540 | name=GSVIVG01033415001; | chr8 | - | View |
| VV06G07590 | name=GSVIVG01025462001; | chr6 | + | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM07G25130 | Tubulin alpha-6 chain Tubulin alpha-5 chain alpha tubulin6;Tubulin alpha-6 chain (Alpha-6-tubulin) | 7 | + | View |