PLAZA 3.0 Dicots : colinear gene pairs

Anchorpoints

Gene id: PT03G15790
Organism: Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
PT01G07310	No description available.	Chr01	-	View

Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id	Description	Chromosome	Strand	Multiplicon
AL7G22150	No description available.	scaffold_7	-	View

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT4G20320	CTP synthase family protein CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT1G30820.1); Has 10893 Blast hits to 10859 proteins in 2946 species: Archae - 237; Bacteria - 5540; Metazoa - 255; Fungi - 235; Plants - 169; Viruses - 0; Other Eukaryotes - 4457 (source: NCBI BLink).	4	+	View
AT2G34890	CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT1G30820.1); Has 10859 Blast hits to 10821 proteins in 2916 species: Archae - 240; Bacteria - 5504; Metazoa - 258; Fungi - 230; Plants - 171; Viruses - 0; Other Eukaryotes - 4456 (source: NCBI BLink). CTP synthase family protein	2	-	View
AT1G30820	CTP synthase family protein CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT2G34890.1); Has 10946 Blast hits to 10907 proteins in 2949 species: Archae - 238; Bacteria - 5576; Metazoa - 256; Fungi - 232; Plants - 177; Viruses - 0; Other Eukaryotes - 4467 (source: NCBI BLink).	1	-	View

Amborella trichopoda

Gene id	Description	Chromosome	Strand	Multiplicon
ATR_00068G01800	No description available.	scaffold00068	-	View

Brassica rapa

Gene id	Description	Chromosome	Strand	Multiplicon
BR05G09700	No description available.	A05	+	View
BR07G05680	No description available.	A07	+	View
BR09G27820	No description available.	A09	+	View

Carica papaya

Gene id	Description	Chromosome	Strand	Multiplicon
CP00030G00400	No description available.	supercontig_30	-	View

Capsella rubella

Gene id	Description	Chromosome	Strand	Multiplicon
CRU_007G19920	No description available.	scaffold_7	-	View
CRU_004G16010	No description available.	scaffold_4	-	View
CRU_001G27910	No description available.	scaffold_1	-	View

Citrus sinensis

Gene id	Description	Chromosome	Strand	Multiplicon
CS00008G01280	No description available.	scaffold00008	-	View

Eucalyptus grandis

Gene id	Description	Chromosome	Strand	Multiplicon
EG0005G32840	No description available.	scaffold_5	+	View

Fragaria vesca

Gene id	Description	Chromosome	Strand	Multiplicon
FV3G12070	CTP synthase 1 (similar to)	LG3	+	View

Medicago truncatula

Gene id	Description	Chromosome	Strand	Multiplicon
MT8G070540	CTP synthase-like protein	chr8	+	View

Prunus persica

Gene id	Description	Chromosome	Strand	Multiplicon
PPE_004G11730	No description available.	scaffold_4	+	View

Theobroma cacao

Gene id	Description	Chromosome	Strand	Multiplicon
TC0002G00020	No description available.	scaffold_2	-	View

Thellungiella parvula

Gene id	Description	Chromosome	Strand	Multiplicon
TP7G18660	similar to AT4G20320\|CTP synthase/ catalytic	ch7-4	+	View
TP1G26710	similar to AT1G30820\|CTP synthase, putative / UTP--ammonia ligase, putative	ch1-1	-	View