Anchorpoints

Gene id
PT03G07300
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G21130No description available.scaffold_2-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G72320pumilio 23 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts. pumilio 23 (PUM23); FUNCTIONS IN: RNA binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 376 Blast hits to 376 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 121; Fungi - 142; Plants - 69; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G28530No description available.A07-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV7G01960No description available.Bvchr7.sca021-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL09G01130No description available.Chr9+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00067G00870No description available.CM3.5_scaffold00067-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00025G01960No description available.supercontig_25+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G18070No description available.scaffold_2-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00136G00250No description available.scaffold00136-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G22510No description available.scaffold_10-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G17020Pumilio domain-containing protein C14orf21 homolog (probable)scf0513160+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM03G42410No description available.Gm03-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G14800No description available.Chr09+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G075640No description available.chr1+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD09G016510No description available.9-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME05875G01580No description available.scaffold05875+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G117545pumilio-family RNA-binding repeatproteinchr7-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS10G25110pumilio-family RNA binding repeat containing protein, expressed10-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G01790No description available.scaffold_3-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC28806G00090No description available.28806-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G123640Pumilio domain-containing protein c (AHRD V1 **-- B6K1Y8_SCHJY)%3B contains Interpro domain(s) IPR011989 Armadillo-like helicalch03+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G034340Pumilio domain-containing protein C14orf21 (AHRD V1 **-- E2AQX1_9HYME); contains Interpro domain(s) IPR011989 Armadillo-like helicalchr03-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0006G12960No description available.scaffold_6+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G27400similar to AT1G72320|APUM23 (Arabidopsis Pumilio 23)ch5-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV09G01630name=GSVIVG01016664001;chr9-View


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Gene id
Species
Description
Chromosome
Strand