PLAZA 3.0 Dicots : colinear gene pairs

Anchorpoints

Gene id: PT01G47180
Organism: Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
PT06G00050	No description available.	Chr06	-	View
PT11G16860	No description available.	Chr11	+	View

Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id	Description	Chromosome	Strand	Multiplicon
AL1G50300	No description available.	scaffold_1	-	View

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT1G55680	Transducin/WD40 repeat-like superfamily protein Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G13340.2); Has 20114 Blast hits to 9589 proteins in 506 species: Archae - 80; Bacteria - 6727; Metazoa - 4776; Fungi - 4188; Plants - 1687; Viruses - 0; Other Eukaryotes - 2656 (source: NCBI BLink).	1	-	View
AT5G56190	Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G13340.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). Transducin/WD40 repeat-like superfamily protein	5	+	View

Brassica rapa

Gene id	Description	Chromosome	Strand	Multiplicon
BR10G09500	No description available.	A10	+	View
BR03G33460	No description available.	A03	+	View
BR02G14180	No description available.	A02	-	View
BR08G00360	No description available.	A08	+	View
BR06G00250	No description available.	A06	+	View

Capsella rubella

Gene id	Description	Chromosome	Strand	Multiplicon
CRU_001G42080	No description available.	scaffold_1	-	View
CRU_008G16090	No description available.	scaffold_8	+	View

Citrus sinensis

Gene id	Description	Chromosome	Strand	Multiplicon
CS00013G02660	No description available.	scaffold00013	-	View

Eucalyptus grandis

Gene id	Description	Chromosome	Strand	Multiplicon
EG0006G31060	No description available.	scaffold_6	-	View

Fragaria vesca

Gene id	Description	Chromosome	Strand	Multiplicon
FV3G34650	No description available.	LG3	-	View

Glycine max

Gene id	Description	Chromosome	Strand	Multiplicon
GM04G12500	No description available.	Gm04	+	View

Gossypium raimondii

Gene id	Description	Chromosome	Strand	Multiplicon
GR09G45480	No description available.	Chr09	+	View

Lotus japonicus

Gene id	Description	Chromosome	Strand	Multiplicon
LJ3G028030	No description available.	chr3	-	View

Malus domestica

Gene id	Description	Chromosome	Strand	Multiplicon
MD11G003580	No description available.	11	+	View
MD03G003190	No description available.	3	+	View

Medicago truncatula

Gene id	Description	Chromosome	Strand	Multiplicon
MT3G010010	transducin/WD40 repeat protein	chr3	-	View

Oryza sativa ssp. japonica

Gene id	Description	Chromosome	Strand	Multiplicon
OS08G38880	WD-40 repeat family protein, putative, expressed	8	+	View

Prunus persica

Gene id	Description	Chromosome	Strand	Multiplicon
PPE_006G03880	No description available.	scaffold_6	-	View

Ricinus communis

Gene id	Description	Chromosome	Strand	Multiplicon
RC28657G00180	No description available.	28657	-	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL10G005730	WD-40 repeat family protein (AHRD V1 **-- D7L1D2_ARALY)%3B contains Interpro domain(s) IPR017986 WD40 repeat%2C region	ch10	-	View
SL07G066130	WD-40 repeat family protein (AHRD V1 ***- D7KN06_ARALY)%3B contains Interpro domain(s) IPR017986 WD40 repeat%2C region	ch07	+	View

Solanum tuberosum

Gene id	Description	Chromosome	Strand	Multiplicon
ST07G027700	WD-40 repeat family protein (AHRD V1 **-- D7L1D2_ARALY); contains Interpro domain(s) IPR017986 WD40 repeat, region	chr07	-	View
ST10G005870	WD-40 repeat family protein (AHRD V1 **-- D7L1D2_ARALY); contains Interpro domain(s) IPR017986 WD40 repeat, region	chr10	+	View

Theobroma cacao

Gene id	Description	Chromosome	Strand	Multiplicon
TC0007G00160	No description available.	scaffold_7	-	View

Thellungiella parvula

Gene id	Description	Chromosome	Strand	Multiplicon
TP6G18040	similar to AT5G56190\|WD-40 repeat family protein	ch6-6	+	View
TP7G24380	similar to AT5G56190\|WD-40 repeat family protein	ch7-4	-	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
VV19G06770	name=GSVIVG01014841001;	chr19	+	View

Zea mays

Gene id	Description	Chromosome	Strand	Multiplicon
ZM05G38830	No description available.	5	-	View