Anchorpoints

Gene id
PPE_003G17980
Organism
Prunus persica

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G35840Encodes the apoprotein of phytochrome;one of a family of photoreceptors that modulate plant growth and development. phytochrome C (PHYC); FUNCTIONS IN: protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Phytochrome, central region (InterPro:IPR013515), Signal transduction histidine kinase, core (InterPro:IPR005467), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Phytochrome chromophore attachment domain (InterPro:IPR016132), ATPase-like, ATP-binding domain (InterPro:IPR003594), PAS fold-2 (InterPro:IPR013654), Phytochrome A/B/C/D/E (InterPro:IPR012129), Phytochrome (InterPro:IPR001294), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Phytochrome chromophore binding site (InterPro:IPR013516), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: phytochrome A (TAIR:AT1G09570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). phytochrome C5+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00047G00200No description available.scaffold00047+View
ATR_00006G01320No description available.scaffold00006+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV9G06620No description available.Bvchr9.sca008-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G02870No description available.Chr2-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00066G00720No description available.CM3.5_scaffold00066+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00136G00250No description available.supercontig_136-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G30310No description available.scaffold_7+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00859G00040No description available.scaffold00859-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G32650Phytochrome C (putative)LG6-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G16630No description available.Chr07+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD09G009450No description available.9-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME10434G00010No description available.scaffold10434-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G045480Phytochrome Fch07+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST07G017280Phytochrome F (AHRD V1 ***- Q41335_SOLLC); contains Interpro domain(s) IPR012129 Phytochrome A/B/C/D/Echr07-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G18970No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G06270similar to AT5G35840|PHYC (phytochrome defective c)ch7-2-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV12G09660name=GSVIVG01030081001;chr12-View


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Gene id
Species
Description
Chromosome
Strand