Anchorpoints
- Gene id
- PPE_002G16870
- Organism
- Prunus persica
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_005G11220 | No description available. | scaffold_5 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL7G36340 | No description available. | scaffold_7 | + | View |
AL6G41340 | No description available. | scaffold_6 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G00335 | RING-H2 finger B1A (RHB1A); FUNCTIONS IN: zinc ion binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41350.1); Has 5425 Blast hits to 5419 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 1535; Fungi - 417; Plants - 2568; Viruses - 6; Other Eukaryotes - 899 (source: NCBI BLink). RING-H2 finger B1A | 4 | + | View |
AT5G41350 | RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger B1A (TAIR:AT4G00335.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). RING/U-box superfamily protein | 5 | - | View |
AT4G23450 | AtAIRP1 gene encodes a C3H2C3-type RING E3 Ub ligase. It has been shown to be a positive regulator in the Arabidopsis ABA-dependent drought response. RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41350.1). | 4 | - | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00009G01330 | No description available. | scaffold00009 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR09G01890 | No description available. | A09 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV1G06330 | No description available. | Bvchr1.sca001 | + | View |
BV5G07280 | No description available. | Bvchr5.sca002 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL01G02350 | No description available. | Chr1 | + | View |
CL05G01700 | No description available. | Chr5 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00006G01790 | No description available. | CM3.5_scaffold00006 | + | View |
CM00005G06660 | No description available. | CM3.5_scaffold00005 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00011G00320 | No description available. | supercontig_11 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_006G35650 | No description available. | scaffold_6 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00009G01170 | No description available. | scaffold00009 | - | View |
CS00001G03330 | No description available. | scaffold00001 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0005G05510 | No description available. | scaffold_5 | - | View |
EG0005G01090 | No description available. | scaffold_5 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV5G03180 | E3 ubiquitin-protein ligase At3g02290 (probable) | LG5 | - | View |
FV7G07590 | E3 ubiquitin-protein ligase At3g02290 (probable) | LG7 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM01G42991 | No description available. | Gm01 | - | View |
GM18G46990 | No description available. | Gm18 | - | View |
GM05G37620 | No description available. | Gm05 | + | View |
GM16G03890 | No description available. | Gm16 | + | View |
GM09G39300 | No description available. | Gm09 | + | View |
GM08G01960 | No description available. | Gm08 | - | View |
GM07G07500 | No description available. | Gm07 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR04G21360 | No description available. | Chr04 | - | View |
GR08G24810 | No description available. | Chr08 | - | View |
GR07G10120 | No description available. | Chr07 | - | View |
GR03G15720 | No description available. | Chr03 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME03581G01580 | No description available. | scaffold03581 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT8G030510 | anaphase-promoting complex subunit 11 RING-H2 finger protein | chr8 | + | View |
MT8G098665 | anaphase-promoting complex subunit 11 RING-H2 finger protein | chr8 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT03G12990 | No description available. | Chr03 | - | View |
PT02G16150 | No description available. | Chr02 | - | View |
PT01G10170 | No description available. | Chr01 | + | View |
PT14G08700 | No description available. | Chr14 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30190G04140 | No description available. | 30190 | - | View |
RC30174G03090 | No description available. | 30174 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL01G094840 | RING finger protein 13 (AHRD V1 *-*- RNF13_RAT)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch01 | - | View |
SL08G081300 | Ring finger protein 126 (AHRD V1 *-*- Q28DW8_XENTR)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch08 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST08G029120 | E3 ubiquitin-protein ligase At3g02290 (AHRD V1 *--- RING3_ARATH); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr08 | + | View |
ST01G032230 | RING finger protein 44 (AHRD V1 *--- RNF44_HUMAN); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr01 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0003G27770 | No description available. | scaffold_3 | - | View |
TC0001G35360 | No description available. | scaffold_1 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G00400 | similar to AT4G00335|RHB1A | ch6-1 | + | View |
TP7G21350 | similar to AT4G23450|zinc finger (C3HC4-type RING finger) family protein | ch7-4 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV15G05580 | name=GSVIVG01027002001; | chr15 | - | View |
VV02G03370 | name=GSVIVG01019385001; | chr2 | + | View |