Anchorpoints
- Gene id
- OS08G37760
- Organism
- Oryza sativa ssp. japonica
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS02G49710 | RING finger protein, putative, expressed | 2 | + | View |
OS09G29310 | zinc finger, C3HC4 type domain containing protein, expressed | 9 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL1G24100 | No description available. | scaffold_1 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G22500 | RING/U-box superfamily protein Gene encodes a putative C3HC4-type RING zinc finger factor. it is induced in response to light and ascorbate stimulus. RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: stem, cotyledon, root, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72200.1); Has 9627 Blast hits to 9604 proteins in 288 species: Archae - 0; Bacteria - 2; Metazoa - 2532; Fungi - 813; Plants - 4919; Viruses - 76; Other Eukaryotes - 1285 (source: NCBI BLink). | 1 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV9G03830 | No description available. | Bvchr9.sca025 | + | View |
BV6G05270 | No description available. | Bvchr6.sca005 | + | View |
BV1G10150 | No description available. | Bvchr1.sca002 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL01G18810 | No description available. | Chr1 | - | View |
CL08G11060 | No description available. | Chr8 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G21100 | No description available. | scaffold_1 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV5G20140 | RING-H2 finger protein ATL1O (similar to) | LG5 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM08G18870 | No description available. | Gm08 | - | View |
GM11G37850 | No description available. | Gm11 | - | View |
GM04G10610 | No description available. | Gm04 | - | View |
GM18G01791 | No description available. | Gm18 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR09G23310 | No description available. | Chr09 | - | View |
GR07G23570 | No description available. | Chr07 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME06916G02150 | No description available. | scaffold06916 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT3G099650 | RING-H2 zinc finger protein C putative | chr3 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30138G00120 | No description available. | 30138 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL04G074790 | RING finger protein (AHRD V1 *-*- C6EUD3_SOYBN)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch04 | + | View |
SL01G105610 | RING finger protein (AHRD V1 *-*- C6EUD3_SOYBN)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch01 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST01G042760 | RING finger protein (AHRD V1 *-*- C6EUD3_SOYBN); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr01 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G09010 | No description available. | scaffold_1 | - | View |
TC0008G09720 | No description available. | scaffold_8 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G19980 | similar to AT1G22500|zinc finger (C3HC4-type RING finger) family protein | ch1-1 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV18G04050 | name=GSVIVG01009096001; | chr18 | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM07G16760 | No description available. | 7 | - | View |
ZM01G30990 | No description available. | 1 | + | View |
ZM02G32050 | No description available. | 2 | - | View |