Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
OS02G49710RING finger protein, putative, expressed2+View
OS09G29310zinc finger, C3HC4 type domain containing protein, expressed9-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G24100No description available.scaffold_1+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G22500RING/U-box superfamily protein Gene encodes a putative C3HC4-type RING zinc finger factor. it is induced in response to light and ascorbate stimulus. RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: stem, cotyledon, root, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72200.1); Has 9627 Blast hits to 9604 proteins in 288 species: Archae - 0; Bacteria - 2; Metazoa - 2532; Fungi - 813; Plants - 4919; Viruses - 76; Other Eukaryotes - 1285 (source: NCBI BLink).1+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV9G03830No description available.Bvchr9.sca025+View
BV6G05270No description available.Bvchr6.sca005+View
BV1G10150No description available.Bvchr1.sca002+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G18810No description available.Chr1-View
CL08G11060No description available.Chr8+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G21100No description available.scaffold_1+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G20140RING-H2 finger protein ATL1O (similar to)LG5+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM08G18870No description available.Gm08-View
GM11G37850No description available.Gm11-View
GM04G10610No description available.Gm04-View
GM18G01791No description available.Gm18-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G23310No description available.Chr09-View
GR07G23570No description available.Chr07+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06916G02150No description available.scaffold06916-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G099650RING-H2 zinc finger protein C putativechr3+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30138G00120No description available.30138+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G074790RING finger protein (AHRD V1 *-*- C6EUD3_SOYBN)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech04+View
SL01G105610RING finger protein (AHRD V1 *-*- C6EUD3_SOYBN)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech01+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G042760RING finger protein (AHRD V1 *-*- C6EUD3_SOYBN); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr01+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G09010No description available.scaffold_1-View
TC0008G09720No description available.scaffold_8-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G19980similar to AT1G22500|zinc finger (C3HC4-type RING finger) family proteinch1-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G04050name=GSVIVG01009096001;chr18+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM07G16760No description available.7-View
ZM01G30990No description available.1+View
ZM02G32050No description available.2-View


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Gene id
Species
Description
Chromosome
Strand