Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- OS08G04180
- Organism
- Oryza sativa ssp. japonica
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G54810 | A.thaliana tryptophan synthase beta subunit (trpB) tryptophan synthase beta-subunit 1 (TSB1); FUNCTIONS IN: tryptophan synthase activity; INVOLVED IN: response to oxidative stress, tryptophan biosynthetic process, response to salt stress, indoleacetic acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: guard cell, root; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain (InterPro:IPR006654), Tryptophan synthase, beta chain, conserved site (InterPro:IPR006653), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2 (TAIR:AT4G27070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). tryptophan synthase beta-subunit 1 | 5 | - | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL03G04750 | No description available. | Chr3 | - | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00001G05800 | No description available. | CM3.5_scaffold00001 | - | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00010G01370 | No description available. | scaffold00010 | - | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR13G16130 | No description available. | Chr13 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME03241G00640 | No description available. | scaffold03241 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL07G064280 | Tryptophan synthase beta chain 1 (AHRD V1 **** Q0WUI8_ARATH)%3B contains Interpro domain(s) IPR006654 Tryptophan synthase%2C beta chain | ch07 | - | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST07G025920 | Tryptophan synthase beta chain 1 (AHRD V1 ***- Q0WUI8_ARATH); contains Interpro domain(s) IPR006654 Tryptophan synthase, beta chain | chr07 | - | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM10G11240 | Tryptophan synthase beta chain 2, chloroplastic Tryptophan synthase beta chain 2, chloroplastic Precursor; Fragment (EC 4.2.1.20)(Orange pericarp 2) | 10 | - | View |
| ZM04G08030 | Tryptophan synthase beta chain 1 Tryptophan synthase beta chain 1 Fragment (EC 4.2.1.20)(Orange pericarp 1) | 4 | - | View |