PLAZA 3.0 Dicots : colinear gene pairs

Anchorpoints

Gene id: OS04G16740
Organism: Oryza sativa ssp. japonica

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
OS10G21240	ATP synthase, putative, expressed	10	+	View
OSCG00350	ATP synthase subunit alpha, chloroplastic	chloroplast	+	View

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
ATCG00120	Encodes the ATPase alpha subunit, which is a subunit of ATP synthase and part of the CF1 portion which catalyzes the conversion of ADP to ATP using the proton motive force. This complex is located in the thylakoid membrane of the chloroplast. ATP synthase subunit alpha ATP synthase subunit alpha (ATPA); FUNCTIONS IN: zinc ion binding, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: response to cold, defense response to bacterium, dATP biosynthetic process from ADP; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, alpha subunit, C-terminal (InterPro:IPR017458), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1 complex, alpha subunit (InterPro:IPR005294), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, alpha subunit protein (TAIR:AT2G07698.1).	chloroplast	-	View

Amborella trichopoda

Gene id	Description	Chromosome	Strand	Multiplicon
ATR_CG00120	ATP synthase subunit alpha, chloroplastic	chloroplast	-	View

Cucumis melo

Gene id	Description	Chromosome	Strand	Multiplicon
CMCG00120	No description available.	chloroplast	-	View

Carica papaya

Gene id	Description	Chromosome	Strand	Multiplicon
CPCG00130	ATP synthase subunit alpha, chloroplastic	chloroplast	-	View

Citrus sinensis

Gene id	Description	Chromosome	Strand	Multiplicon
CSCG00140	ATP synthase subunit alpha, chloroplastic	chloroplast	-	View

Eucalyptus grandis

Gene id	Description	Chromosome	Strand	Multiplicon
EGCG00100	No description available.	chloroplast	-	View

Glycine max

Gene id	Description	Chromosome	Strand	Multiplicon
GMCG00430	ATP synthase subunit alpha, chloroplastic	chloroplast	+	View

Gossypium raimondii

Gene id	Description	Chromosome	Strand	Multiplicon
GRCG00120	No description available.	chloroplast	-	View

Lotus japonicus

Gene id	Description	Chromosome	Strand	Multiplicon
LJCG00420	ATP synthase subunit alpha, chloroplastic	chloroplast	+	View

Manihot esculenta

Gene id	Description	Chromosome	Strand	Multiplicon
MECG00150	ATP synthase subunit alpha, chloroplastic	chloroplast	-	View

Medicago truncatula

Gene id	Description	Chromosome	Strand	Multiplicon
MT00G15420	ATP synthase F1 C alpha subunit	scaffold0002	+	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PTCG00120	ATP synthase subunit alpha, chloroplastic ATPase alpha subunit; ATP synthetase alpha subunit	chloroplast	-	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SLCG00120	ATP synthase subunit alpha, chloroplastic ATPase alpha subunit	chloroplast	-	View

Solanum tuberosum

Gene id	Description	Chromosome	Strand	Multiplicon
STCG00120	ATP synthase subunit alpha, chloroplastic	chloroplast	-	View

Theobroma cacao

Gene id	Description	Chromosome	Strand	Multiplicon
TCCG00130	No description available.	chloroplast	-	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
VVCG00140	ATP synthase subunit alpha, chloroplastic	chloroplast	-	View