Anchorpoints

Gene id
MT8G030550
Organism
Medicago truncatula

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
MT7G078090ATP-dependent helicase BRMchr7+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G46020BRAHMA (BRM); FUNCTIONS IN: helicase activity, transcription regulator activity, DNA binding, ATP binding; INVOLVED IN: ATP-dependent chromatin remodeling, organ boundary specification between lateral organs and the meristem, regulation of gene expression, epigenetic; LOCATED IN: cytosol, nucleus, chromatin remodeling complex; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Bromodomain (InterPro:IPR001487), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). transcription regulatory protein SNF2, putative Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.2+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00009G01520No description available.scaffold00009-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV1G06380No description available.Bvchr1.sca001-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G01730No description available.Chr5-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00006G01830No description available.CM3.5_scaffold00006-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00011G00280No description available.supercontig_11+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G27680No description available.scaffold_4+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00001G03280No description available.scaffold00001+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0004G19020No description available.scaffold_4+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G07630ATP-dependent helicase BRM (AtBRM) (putative)LG7-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM09G39380No description available.Gm09-View
GM07G07550No description available.Gm07-View
GM18G46930No description available.Gm18+View
GM16G03950No description available.Gm16-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G12110No description available.Chr08-View
GR07G10080No description available.Chr07+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02658G01130No description available.scaffold02658-View
ME03581G01630No description available.scaffold03581-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G16820No description available.scaffold_2+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G16090No description available.Chr02+View
PT14G08650No description available.Chr14+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30174G03050No description available.30174+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G094800Chromodomain-helicase-DNA-binding protein 1 (AHRD V1 *--* CHD1_DROME)%3B contains Interpro domain(s) IPR000330 SNF2-relatedch01+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G032190Chromodomain-helicase-DNA-binding protein 1 (AHRD V1 *--* CHD1_DROME); contains Interpro domain(s) IPR000330 SNF2-relatedchr01+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G35420No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G28080similar to AT2G46020|transcription regulatory protein SNF2, putativech4-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV15G05150name=GSVIVG01026952001;chr15-View


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Gene id
Species
Description
Chromosome
Strand