Anchorpoints

Gene id
MT4G118630
Organism
Medicago truncatula

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G18810SC35-like splicing factor 28 (SCL28); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nuclear speck, nucleus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 30A (TAIR:AT3G13570.1); Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). encodes an SC35-like splicing factor of 28 kD localized to the nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. SC35-like splicing factor 285-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G06390No description available.Chr5+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00006G07020No description available.CM3.5_scaffold00006+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00016G00870No description available.supercontig_16+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G16690No description available.scaffold_6-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00011G02300No description available.scaffold00011+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G10120No description available.scaffold_2+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV4G11480Splicing factor, arginine/serine-rich 13A (probable)LG4+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM17G02470No description available.Gm17+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR11G18390No description available.Chr11+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ4G038660No description available.chr4-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G13680No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G02610No description available.Chr10-View
PT08G19670No description available.Chr08-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29726G00720No description available.29726+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G022380Splicing factor arginine/serine-rich 4 (AHRD V1 *--- B6U7F9_MAIZE); contains Interpro domain(s) IPR012677 Nucleotide-binding, alpha-beta plaitchr01-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G27630No description available.scaffold_4+View


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Gene id
Species
Description
Chromosome
Strand