Anchorpoints

Gene id
MT3G092830
Organism
Medicago truncatula

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G24590No description available.scaffold_6-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G24520Required for the accumulation of purple anthocyanins in leaves and stems. Involved in trichome and root hair development. Controls epidermal cell fate specification. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Based on clonal analysis and other methonds TTG1 has been shown to act non-cell autonomously and to move via plasmodesmata between cells.Localization and levels of TTG1 affect patterning of leaf trichomes. Auxin and ethylene responsiveness of TTG1 transcription is lost in myb12 mutants. Transducin/WD40 repeat-like superfamily protein TRANSPARENT TESTA GLABRA 1 (TTG1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G12910.1); Has 6142 Blast hits to 5599 proteins in 374 species: Archae - 8; Bacteria - 429; Metazoa - 2235; Fungi - 1639; Plants - 1018; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink).5-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G25860No description available.A06-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV3G17080No description available.Bvchr3.sca002+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00003G01630No description available.supercontig_3-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G21650No description available.scaffold_6-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0001G11330No description available.scaffold_1+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G34790Protein TRANSPARENT TESTA GLABRA 1 (similar to)LG7+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM06G14180No description available.Gm06-View
GM04G40610No description available.Gm04+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR12G00120No description available.Chr12-View
GR04G12520No description available.Chr04+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G015650No description available.chr1-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD07G020720No description available.7-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G30580No description available.scaffold_2-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT15G00260No description available.Chr15+View
PT12G00610No description available.Chr12+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G081210WD-repeat protein (AHRD V1 **-- C7EAF4_TOBAC)%3B contains Interpro domain(s) IPR017986 WD40 repeat%2C regionch03+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G017020WD-repeat protein (AHRD V1 **-- C7EAF4_TOBAC); contains Interpro domain(s) IPR017986 WD40 repeat, regionchr03-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G20900No description available.scaffold_3-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G22830similar to AT5G24520|TTG1 (TRANSPARENT TESTA GLABRA 1)ch2-4+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV16G09860name=GSVIVG01038651001;chr16+View


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Gene id
Species
Description
Chromosome
Strand