Anchorpoints

Gene id
ME03614G01430
Organism
Manihot esculenta

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
ME11297G00880No description available.scaffold11297-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G02980No description available.scaffold_3-View
AL6G17490No description available.scaffold_6-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G03550RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G17600.1); Has 9886 Blast hits to 9859 proteins in 306 species: Archae - 0; Bacteria - 2; Metazoa - 2318; Fungi - 804; Plants - 5150; Viruses - 98; Other Eukaryotes - 1514 (source: NCBI BLink).3-View
AT5G17600RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G03550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G07540No description available.A03-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV3G09670No description available.Bvchr3.sca001-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL06G08170No description available.Chr6-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G15470No description available.scaffold_6-View
CRU_003G02570No description available.scaffold_3-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00326G00150No description available.scaffold00326+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0005G14500No description available.scaffold_5+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G18060Probable RING-H2 finger protein ATL5GLG7-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR13G19930No description available.Chr13+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD02G023030No description available.2+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT13G07350No description available.Chr13+View
PT19G04390No description available.Chr19-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30148G00440No description available.30148+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G006260E3 ubiquitin-protein ligase Os04g0590900 (AHRD V1 *-** ATL41_ORYSJ); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr06+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0005G23130No description available.scaffold_5-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G26620similar to AT5G17600|zinc finger (C3HC4-type RING finger) family proteinch6-6+View
TP3G02530similar to AT3G03550|zinc finger (C3HC4-type RING finger) family proteinch3-1-View


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Gene id
Species
Description
Chromosome
Strand