Anchorpoints

Gene id
ME03241G00640
Organism
Manihot esculenta

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G14920No description available.scaffold_7-View
AL8G20120No description available.scaffold_8-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G54810A.thaliana tryptophan synthase beta subunit (trpB) tryptophan synthase beta-subunit 1 (TSB1); FUNCTIONS IN: tryptophan synthase activity; INVOLVED IN: response to oxidative stress, tryptophan biosynthetic process, response to salt stress, indoleacetic acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: guard cell, root; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain (InterPro:IPR006654), Tryptophan synthase, beta chain, conserved site (InterPro:IPR006653), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2 (TAIR:AT4G27070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). tryptophan synthase beta-subunit 15-View
AT4G27070tryptophan synthase beta-subunit 2 Tryptophan synthase beta. Expressed at low levels in all tissues. tryptophan synthase beta-subunit 2 (TSB2); CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain (InterPro:IPR006654), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Tryptophan synthase, beta chain, conserved site (InterPro:IPR006653); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 1 (TAIR:AT5G54810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).4+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G17380No description available.A01+View
BR10G08340No description available.A10-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV0G68790No description available.0090.scaffold00321-View
BV0G14430No description available.Bvchr8_un.sca003+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G15790No description available.Chr5+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00032G00240No description available.CM3.5_scaffold00032+View
CM00001G05800No description available.CM3.5_scaffold00001-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00097G00460No description available.supercontig_97-View
CP00198G00190No description available.supercontig_198+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G12980No description available.scaffold_7-View
CRU_008G14710No description available.scaffold_8-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00010G01370No description available.scaffold00010-View
CS00215G00170No description available.scaffold00215-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G29220No description available.scaffold_6+View
EG0004G10350No description available.scaffold_4+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G24190Tryptophan synthase beta chain 2, chloroplastic, Precursor (putative)LG3-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM18G12090No description available.Gm18-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G42550No description available.Chr09+View
GR13G16130No description available.Chr13+View
GR10G17800No description available.Chr10+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD03G017710No description available.3+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS08G04180tryptophan synthase beta chain 1, putative, expressed8+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G19910No description available.scaffold_4-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT11G13600No description available.Chr11-View
PT01G42030No description available.Chr01-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29842G01270No description available.29842-View
RC29666G00660No description available.29666+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G064280Tryptophan synthase beta chain 1 (AHRD V1 **** Q0WUI8_ARATH)%3B contains Interpro domain(s) IPR006654 Tryptophan synthase%2C beta chainch07-View
SL10G006400Tryptophan synthase beta chain 1 (AHRD V1 **** Q0WUI8_ARATH)%3B contains Interpro domain(s) IPR006654 Tryptophan synthase%2C beta chainch10+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST10G005160Tryptophan synthase beta chain 1 (AHRD V1 ***- Q0WUI8_ARATH); contains Interpro domain(s) IPR006654 Tryptophan synthase, beta chainchr10-View
ST07G025920Tryptophan synthase beta chain 1 (AHRD V1 ***- Q0WUI8_ARATH); contains Interpro domain(s) IPR006654 Tryptophan synthase, beta chainchr07-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0006G20900No description available.scaffold_6+View
TC0007G04340No description available.scaffold_7+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G16750similar to AT5G54810|TSB1 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT 1)ch6-6-View
TP7G25040similar to AT4G27070|TSB2 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT 2)ch7-4+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV19G00650name=GSVIVG01001997001;chr19-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM10G11240Tryptophan synthase beta chain 2, chloroplastic Tryptophan synthase beta chain 2, chloroplastic Precursor; Fragment (EC 4.2.1.20)(Orange pericarp 2)10-View


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Description
Chromosome
Strand