Anchorpoints

Gene id
MD15G020320
Organism
Malus domestica

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G03840No description available.scaffold_7+View
AL5G20400No description available.scaffold_5-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G50820photosystem II subunit O-2 Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes: psbO1 and psbO2. PsbO2 is the minor isoform in the wild-type. Mutants defective in this gene have been shown to be affected in the dephosphorylation of the D1 protein of PSII. photosystem II subunit O-2 (PSBO2); FUNCTIONS IN: oxygen evolving activity, poly(U) RNA binding; INVOLVED IN: photosynthesis, light reaction, photoinhibition, photosystem II assembly, photosystem II stabilization, regulation of protein amino acid dephosphorylation; LOCATED IN: in 9 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II manganese-stabilising protein PsbO (InterPro:IPR002628); BEST Arabidopsis thaliana protein match is: PS II oxygen-evolving complex 1 (TAIR:AT5G66570.1); Has 534 Blast hits to 532 proteins in 148 species: Archae - 0; Bacteria - 144; Metazoa - 1; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink).3-View
AT5G66570PS II oxygen-evolving complex 1 (PSBO1); FUNCTIONS IN: oxygen evolving activity, poly(U) RNA binding; INVOLVED IN: in 6 processes; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II manganese-stabilising protein PsbO (InterPro:IPR002628); BEST Arabidopsis thaliana protein match is: photosystem II subunit O-2 (TAIR:AT3G50820.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). PS II oxygen-evolving complex 1 Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes: psbO1 and psbO2. PsbO1 is the major isoform in the wild-type. In plsp1-1 mutant plastids, the nonmature form of the protein localizes in the membrane.5+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G16600No description available.Chr1-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00007G05350No description available.CM3.5_scaffold00007-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00015G00810No description available.supercontig_15+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G27090No description available.scaffold_8-View
CRU_005G16070No description available.scaffold_5-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00006G02870No description available.scaffold00006+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0009G07950No description available.scaffold_9+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G37500Oxygen-evolving enhancer protein 1, chloroplastic (OEE1), Precursor (putative)LG5+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM02G06830No description available.Gm02-View
GM01G38750No description available.Gm01-View
GM11G06510No description available.Gm11+View
GM16G25860No description available.Gm16-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G20800No description available.Chr07-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G031540No description available.chr2+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME09274G00180No description available.scaffold09274-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G078870photosystem II oxygen-evolving enhancer proteinchr8-View
MT5G018670photosystem II oxygen-evolving enhancer proteinchr5+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G16750No description available.scaffold_7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G03370No description available.Chr07-View
PT05G13040No description available.Chr05-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29676G00840No description available.29676+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G090030Oxygen-evolving enhancer protein 1 of photosystem II (AHRD V1 ***- A8J0E4_CHLRE)%3B contains Interpro domain(s) IPR002628 Photosystem II manganese-stabilizing protein PsbOch02-View
SL02G065400Oxygen-evolving enhancer protein 1 of photosystem II (AHRD V1 ***- A8J0E4_CHLRE)%3B contains Interpro domain(s) IPR002628 Photosystem II manganese-stabilizing protein PsbO Oxygen-evolving enhancer protein 1, chloroplasticch02+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G012180Oxygen-evolving enhancer protein 1 of photosystem II (AHRD V1 ***- A8J0E4_CHLRE); contains Interpro domain(s) IPR002628 Photosystem II manganese-stabilizing protein PsbOchr02+View
ST02G032940Oxygen-evolving enhancer protein 1 of photosystem II (AHRD V1 ***- A8J0E4_CHLRE); contains Interpro domain(s) IPR002628 Photosystem II manganese-stabilizing protein PsbO Oxygen-evolving enhancer protein 1, chloroplasticchr02+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G04300No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G34560similar to AT3G50820|PSBO2 (PHOTOSYSTEM II SUBUNIT O-2)ch7-6-View
TP5G11400similar to AT3G50820|PSBO2 (PHOTOSYSTEM II SUBUNIT O-2)ch5-1+View
TP2G30140similar to AT5G66570|PSBO1 (PS II OXYGEN-EVOLVING COMPLEX 1)ch2-4-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G08160name=GSVIVG01009624001;chr18+View


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