Anchorpoints
- Gene id
- MD12G015390
- Organism
- Malus domestica
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD01G006230 | No description available. | 1 | + | View |
MD02G011890 | No description available. | 2 | - | View |
MD07G019500 | No description available. | 7 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL8G17970 | No description available. | scaffold_8 | - | View |
AL7G35940 | No description available. | scaffold_7 | - | View |
AL2G00770 | No description available. | scaffold_2 | - | View |
AL2G01300 | No description available. | scaffold_2 | + | View |
AL7G04410 | No description available. | scaffold_7 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G41700 | One of the polypeptides that constitute the ubiquitin-conjugating enzyme E2 ubiquitin conjugating enzyme 8 (UBC8); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 28 (TAIR:AT1G64230.2); Has 10671 Blast hits to 10632 proteins in 401 species: Archae - 0; Bacteria - 4; Metazoa - 4624; Fungi - 2337; Plants - 1940; Viruses - 26; Other Eukaryotes - 1740 (source: NCBI BLink). ubiquitin conjugating enzyme 8 | 5 | + | View |
AT1G75440 | ubiquitin-conjugating enzyme 16 (UBC16); FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 18 (TAIR:AT5G42990.1); Has 8796 Blast hits to 8793 proteins in 382 species: Archae - 0; Bacteria - 2; Metazoa - 3895; Fungi - 1929; Plants - 1614; Viruses - 20; Other Eukaryotes - 1336 (source: NCBI BLink). ubiquitin-conjugating enzyme 16 | 1 | + | View |
AT4G36410 | ubiquitin-conjugating enzyme ubiquitin-conjugating enzyme 17 (UBC17); FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity; INVOLVED IN: response to gibberellin stimulus, ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 16 (TAIR:AT1G75440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ubiquitin-conjugating enzyme 17 | 4 | + | View |
AT1G64230 | ubiquitin-conjugating enzyme 28 ubiquitin-conjugating enzyme 28 (UBC28); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin conjugating enzyme 8 (TAIR:AT5G41700.5); Has 10460 Blast hits to 10419 proteins in 398 species: Archae - 0; Bacteria - 4; Metazoa - 4543; Fungi - 2213; Plants - 1965; Viruses - 26; Other Eukaryotes - 1709 (source: NCBI BLink). | 1 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR09G12350 | No description available. | A09 | - | View |
BR01G30110 | No description available. | A01 | + | View |
BR07G30750 | No description available. | A07 | + | View |
BR03G55220 | No description available. | A03 | + | View |
BR02G15870 | No description available. | A02 | + | View |
BR03G40050 | No description available. | A03 | + | View |
BR09G11740 | No description available. | A09 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV5G07300 | No description available. | Bvchr5.sca002 | + | View |
BV1G08640 | No description available. | Bvchr1.sca001 | + | View |
BV6G16290 | No description available. | Bvchr6.sca002 | - | View |
BV5G06520 | No description available. | Bvchr5.sca002 | - | View |
BV3G02680 | No description available. | Bvchr3.sca003 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL01G00500 | No description available. | Chr1 | - | View |
CL06G07650 | No description available. | Chr6 | + | View |
CL01G01940 | No description available. | Chr1 | - | View |
CL05G01720 | No description available. | Chr5 | + | View |
CL01G02360 | No description available. | Chr1 | + | View |
CL05G09830 | No description available. | Chr5 | + | View |
CL07G10150 | No description available. | Chr7 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00006G01810 | No description available. | CM3.5_scaffold00006 | + | View |
CM00005G06650 | No description available. | CM3.5_scaffold00005 | - | View |
CM00005G07100 | No description available. | CM3.5_scaffold00005 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00003G00420 | No description available. | supercontig_3 | + | View |
CP00006G01800 | No description available. | supercontig_6 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_002G21060 | No description available. | scaffold_2 | + | View |
CRU_007G03640 | No description available. | scaffold_7 | - | View |
CRU_007G32440 | No description available. | scaffold_7 | - | View |
CRU_004G27690 | No description available. | scaffold_4 | - | View |
CRU_002G00590 | No description available. | scaffold_2 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00028G00540 | No description available. | scaffold00028 | - | View |
CS00017G01520 | No description available. | scaffold00017 | + | View |
CS00002G04760 | No description available. | scaffold00002 | + | View |
CS00009G01850 | No description available. | scaffold00009 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0009G20190 | No description available. | scaffold_9 | + | View |
EG0005G05500 | No description available. | scaffold_5 | - | View |
EG0009G19600 | No description available. | scaffold_9 | - | View |
EG0004G14250 | No description available. | scaffold_4 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV5G03160 | Ubiquitin-conjugating enzyme E2 4 (similar to) | LG5 | - | View |
FV7G37020 | SUMO-conjugating enzyme UBC9 | LG7 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM08G01940 | No description available. | Gm08 | - | View |
GM01G37480 | No description available. | Gm01 | - | View |
GM18G46940 | No description available. | Gm18 | - | View |
GM16G03940 | No description available. | Gm16 | + | View |
GM07G07540 | No description available. | Gm07 | + | View |
GM06G13020 | No description available. | Gm06 | + | View |
GM11G07810 | No description available. | Gm11 | + | View |
GM05G37650 | No description available. | Gm05 | + | View |
GM09G39370 | No description available. | Gm09 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR08G27130 | No description available. | Chr08 | - | View |
GR09G19840 | No description available. | Chr09 | - | View |
GR03G15730 | No description available. | Chr03 | + | View |
GR01G07030 | No description available. | Chr01 | - | View |
GR03G01220 | No description available. | Chr03 | + | View |
GR02G12640 | No description available. | Chr02 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ4G046180 | No description available. | chr4 | + | View |
LJ2G029920 | No description available. | chr2 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME03741G00440 | No description available. | scaffold03741 | + | View |
ME09657G00080 | No description available. | scaffold09657 | + | View |
ME07520G02150 | No description available. | scaffold07520 | + | View |
ME06512G00560 | No description available. | scaffold06512 | - | View |
ME02658G01120 | No description available. | scaffold02658 | + | View |
ME06089G00360 | No description available. | scaffold06089 | - | View |
ME05280G00330 | No description available. | scaffold05280 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT8G028920 | ubiquitin-conjugating enzyme | chr8 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS10G39120 | ubiquitin-conjugating enzyme, putative, expressed | 10 | - | View |
OS03G03130 | ubiquitin-conjugating enzyme, putative, expressed | 3 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G38170 | No description available. | scaffold_1 | - | View |
PPE_006G01320 | No description available. | scaffold_6 | - | View |
PPE_007G18340 | No description available. | scaffold_7 | - | View |
PPE_002G29330 | No description available. | scaffold_2 | + | View |
PPE_005G11190 | No description available. | scaffold_5 | - | View |
PPE_005G19340 | No description available. | scaffold_5 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT05G11860 | No description available. | Chr05 | + | View |
PT03G12970 | No description available. | Chr03 | - | View |
PT05G23210 | No description available. | Chr05 | + | View |
PT07G01870 | No description available. | Chr07 | + | View |
PT14G08660 | No description available. | Chr14 | - | View |
PT02G03080 | No description available. | Chr02 | - | View |
PT01G09490 | No description available. | Chr01 | - | View |
PT06G11020 | No description available. | Chr06 | - | View |
PT01G10190 | No description available. | Chr01 | + | View |
PT03G13620 | No description available. | Chr03 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29634G00080 | No description available. | 29634 | + | View |
RC30170G04560 | No description available. | 30170 | + | View |
RC30190G04120 | No description available. | 30190 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL08G008220 | Ubiquitin-conjugating enzyme E2 10 (AHRD V1 ***- UBC10_ARATH)%3B contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme%2C E2 | ch08 | + | View |
SL10G012240 | Ubiquitin-conjugating enzyme (AHRD V1 ***- D2VN46_NAEGR)%3B contains Interpro domain(s) IPR015581 Ubiquitin-conjugating enzyme | ch10 | + | View |
SL01G094810 | Ubiquitin-conjugating enzyme (AHRD V1 **** D2VN46_NAEGR)%3B contains Interpro domain(s) IPR015581 Ubiquitin-conjugating enzyme | ch01 | - | View |
SL04G080810 | Ubiquitin-conjugating enzyme E2 W (AHRD V1 **** B6SI81_MAIZE)%3B contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme%2C E2 | ch04 | - | View |
SL02G084760 | Ubiquitin-conjugating enzyme E2 W (AHRD V1 **** B6SI81_MAIZE)%3B contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme%2C E2 | ch02 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST04G034210 | Ubiquitin-conjugating enzyme E2 W (AHRD V1 **** B6SI81_MAIZE); contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme, E2 | chr04 | - | View |
ST12G027200 | Ubiquitin-conjugating enzyme (AHRD V1 ***- E9CHE9_9EUKA); contains Interpro domain(s) IPR015580 RUB1 conjugating enzyme Ubc12 | chr12 | + | View |
ST08G009600 | Ubiquitin conjugating enzyme (AHRD V1 **** E9D4Y9_COCPO); contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme, E2 | chr08 | - | View |
ST03G024850 | Ubiquitin-conjugating enzyme E2 (AHRD V1 **** E9F1K0_METAN); contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme, E2 | chr03 | + | View |
ST02G027880 | Ubiquitin-conjugating enzyme E2 W (AHRD V1 **** B4FMX0_MAIZE); contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme, E2 | chr02 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G02510 | No description available. | scaffold_1 | + | View |
TC0003G19240 | No description available. | scaffold_3 | + | View |
TC0001G35410 | No description available. | scaffold_1 | + | View |
TC0003G27750 | No description available. | scaffold_3 | - | View |
TC0008G03300 | No description available. | scaffold_8 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP7G34070 | similar to AT4G36410|UBC17 (UBIQUITIN-CONJUGATING ENZYME 17) | ch7-6 | + | View |
TP5G30590 | similar to AT1G75440|UBC16 (ubiquitin-conjugating enzyme 16) | ch5-7 | + | View |
TP2G00510 | similar to AT1G64230|ubiquitin-conjugating enzyme, putative | ch2-1 | - | View |
TP7G00370 | similar to AT5G41700|UBC8 (UBIQUITIN CONJUGATING ENZYME 8) | ch7-1 | - | View |
TP4G28090 | similar to AT2G46030|UBC6 (ubiquitin-conjugating enzyme 6) | ch4-6 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV16G06940 | name=GSVIVG01028729001; | chr16 | - | View |
VV06G07340 | name=GSVIVG01025431001; | chr6 | + | View |
VV04G01380 | name=GSVIVG01018860001; | chr4 | - | View |
VV02G04240 | name=GSVIVG01019484001; | chr2 | + | View |
VV18G09560 | name=GSVIVG01009784001; | chr18 | - | View |
VV02G03390 | name=GSVIVG01019387001; | chr2 | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM01G03640 | Ubiquitin carrier protein (EC 6.3.2.-) | 1 | - | View |
ZM01G01520 | ubiquitin-conjugating enzyme E2 I | 1 | + | View |
ZM06G10730 | NEDD8-conjugating enzyme Ubc12-like | 6 | - | View |
ZM09G28450 | No description available. | 9 | - | View |
ZM03G28450 | No description available. | 3 | - | View |
ZM06G16030 | No description available. | 6 | + | View |