Anchorpoints

Gene id
LJCG00050
Organism
Lotus japonicus

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G10770No description available.scaffold_2+View
AL2G10440No description available.scaffold_2-View
AL2G10100No description available.scaffold_2-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
ATCG00490large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ribulose-bisphosphate carboxylases RBCL; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: response to cadmium ion, carbon fixation, peptidyl-cysteine S-nitrosylation, response to abscisic acid stimulus; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, large subunit, C-terminal (InterPro:IPR000685), Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (InterPro:IPR017443), Ribulose bisphosphate carboxylase, large subunit, N-terminal (InterPro:IPR017444), Ribulose bisphosphate carboxylase, large chain, active site (InterPro:IPR020878); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase large chain, catalytic domain (TAIR:AT2G07732.1).chloroplast+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_CG00490Ribulose bisphosphate carboxylase large chainchloroplast+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CMCG00490No description available.chloroplast+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CPCG00500Ribulose bisphosphate carboxylase large chain see PubMed ID 8083883 for discussion on the translation start of rbcLchloroplast+View

Chlamydomonas reinhardtii

Gene id Description Chromosome Strand Multiplicon
CRCG00730Ribulose bisphosphate carboxylase large chainchloroplast-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CSCG00530Ribulose bisphosphate carboxylase large chainchloroplast+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EGCG00440No description available.chloroplast+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GMCG00060Ribulose bisphosphate carboxylase large chainchloroplast-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GRCG00490RuBisCO large subunitchloroplast+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
MECG00540Ribulose bisphosphate carboxylase large chainchloroplast+View
ME04355G00110No description available.scaffold04355-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G021770ribulose bisphosphate carboxylase large chain domain proteinchr7-View
MT4G051270ribulose bisphosphate carboxylase large chain domain proteinchr4+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OSCG00540Ribulose bisphosphate carboxylase large chain rbcL; RuBisCO large subunitchloroplast+View
OS10G21268Ribulose bisphosphate carboxylase large chain ribulose bisphosphate carboxylase large chain precursor, putative, expressed10+View

Physcomitrella patens

Gene id Description Chromosome Strand Multiplicon
PPCG00360No description available.chloroplast-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PTCG00510Rubisco large subunit Ribulose bisphosphate carboxylase large chainchloroplast+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29923G00080No description available.29923+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SLCG00490Ribulose bisphosphate carboxylase large chain RuBisCo large subunitchloroplast+View
SL01G007330Ribulose bisphosphate carboxylase large chain Ribulose bisphosphate carboxylase large chain (AHRD V1 ***- RBL_SOLLC)%3B contains Interpro domain(s) IPR000685 Ribulose bisphosphate carboxylase%2C large subunit%2C C-terminalch01+View
SL12G062420Ribulose bisphosphate carboxylase large chain (Fragment) (AHRD V1 ***- B8QEU7_9VIRI)%3B contains Interpro domain(s) IPR000685 Ribulose bisphosphate carboxylase%2C large subunit%2C C-terminalch12-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
STCG00480Ribulose bisphosphate carboxylase large chainchloroplast+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TCCG00500No description available.chloroplast+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VVCG00530Ribulose bisphosphate carboxylase large chainchloroplast+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZMCG00120Ribulose bisphosphate carboxylase large chain RuBisCO large subunit;Ribulose bisphosphate carboxylase large chain Precursor (RuBisCO large subunit)(EC 4.1.1.39) ORF62chloroplast+View


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Gene id
Species
Description
Chromosome
Strand