Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- GR09G24600
- Organism
- Gossypium raimondii
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR05G08940 | No description available. | Chr05 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL1G39400 | No description available. | scaffold_1 | - | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G44446 | CHLORINA 1 (CH1); CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site (InterPro:IPR015881), Pheophorbide a oxygenase (InterPro:IPR013626); BEST Arabidopsis thaliana protein match is: translocon at the inner envelope membrane of chloroplasts 55-II (TAIR:AT2G24820.1); Has 6355 Blast hits to 6353 proteins in 945 species: Archae - 23; Bacteria - 4238; Metazoa - 95; Fungi - 51; Plants - 426; Viruses - 0; Other Eukaryotes - 1522 (source: NCBI BLink). Encodes chlorophyllide a oxygenase which converts chlorophyllide a to chlorophyllide b by catalyzing two successive hydroxylations at the 7-methyl group of chlorophyllide a . Mutants are deficient in pigments that associate with thylakoid membrane proteins, lacking chlorophyll b and light-harvesting proteins of photosystem II. The protein was shown through cross-linking experiments to interact with Toc75, Toc34, Tic40, Tic20 and Tic22. Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain | 1 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR00G11060 | No description available. | Scaffold000123 | - | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL08G05660 | No description available. | Chr8 | + | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM01598G00390 | No description available. | CM3.5_scaffold01598 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00064G00880 | No description available. | supercontig_64 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_001G33430 | No description available. | scaffold_1 | - | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00004G00720 | No description available. | scaffold00004 | - | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0006G32400 | No description available. | scaffold_6 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV2G29470 | Chlorophyllide a oxygenase, chloroplastic (Chlorophyll a oxygenase), Precursor (similar to) | LG2 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM04G42840 | No description available. | Gm04 | - | View |
| GM06G11920 | No description available. | Gm06 | + | View |
| GM14G23860 | No description available. | Gm14 | - | View |
| GM13G03430 | No description available. | Gm13 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD08G017150 | No description available. | 8 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME07238G00230 | No description available. | scaffold07238 | + | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT1G030480 | chlorophyllide A oxygenase | chr1 | - | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_001G50010 | No description available. | scaffold_1 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT02G08320 | No description available. | Chr02 | - | View |
| PT05G17830 | No description available. | Chr05 | + | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC29908G00170 | No description available. | 29908 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL06G060310 | Chlorophyllide a oxygenase (AHRD V1 **** B6TZB6_MAIZE)%3B contains Interpro domain(s) IPR013626 Pheophorbide a oxygenase | ch06 | - | View |
| SL11G012850 | Chlorophyllide a oxygenase (AHRD V1 ***- B6TZB6_MAIZE)%3B contains Interpro domain(s) IPR013626 Pheophorbide a oxygenase | ch11 | - | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST06G019410 | Chlorophyllide a oxygenase (AHRD V1 **** B6TZB6_MAIZE); contains Interpro domain(s) IPR013626 Pheophorbide a oxygenase | chr06 | - | View |
| ST11G014750 | Chlorophyllide a oxygenase (Fragment) (AHRD V1 *-** C4TGC0_KLEFL); contains Interpro domain(s) IPR013626 Pheophorbide a oxygenase | chr11 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0008G12180 | No description available. | scaffold_8 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP1G33540 | similar to AT1G44446|CH1 (CHLORINA 1) | ch1-2 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV18G02070 | name=GSVIVG01008862001; | chr18 | - | View |