Anchorpoints
- Gene id
- GR09G04860
- Organism
- Gossypium raimondii
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR03G06180 | No description available. | Chr03 | - | View |
GR10G10510 | No description available. | Chr10 | - | View |
GR11G07140 | No description available. | Chr11 | - | View |
GR01G02620 | No description available. | Chr01 | - | View |
GR01G00890 | No description available. | Chr01 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL3G36270 | No description available. | scaffold_3 | + | View |
AL6G26060 | No description available. | scaffold_6 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G25880 | NADP-malic enzyme 3 NADP-malic enzyme 3 (NADP-ME3); FUNCTIONS IN: malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity, oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor, malic enzyme activity; INVOLVED IN: N-terminal protein myristoylation, malate metabolic process, protein homooligomerization; LOCATED IN: cytosol; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 2 (TAIR:AT5G11670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). The malic enzyme (EC 1.1.1.40) encoded by the ATNADP-ME3 is presumably cytosolic and restricted in its expression by both developmental and cell-specific signals. | 5 | + | View |
AT2G19900 | NADP-malic enzyme 1 NADP-malic enzyme 1 (NADP-ME1); FUNCTIONS IN: malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity, oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor, malic enzyme activity; INVOLVED IN: malate metabolic process, protein homooligomerization; LOCATED IN: cytosol; EXPRESSED IN: embryo, sperm cell, root, stamen, seed; EXPRESSED DURING: 4 anthesis, D bilateral stage; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 9392 Blast hits to 9373 proteins in 2414 species: Archae - 143; Bacteria - 6244; Metazoa - 609; Fungi - 220; Plants - 469; Viruses - 0; Other Eukaryotes - 1707 (source: NCBI BLink). The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME1 is expressed in response to developmental and cell-specific signals. The enzyme is active in vitro and appears to function as a homohexamer or homooctamer. It is believed to be a cytosolic protein. | 2 | - | View |
AT5G11670 | NADP-malic enzyme 2 (NADP-ME2); FUNCTIONS IN: malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity, oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor, malic enzyme activity; INVOLVED IN: response to cadmium ion, malate metabolic process, pentose-phosphate shunt, oxidative branch, protein homooligomerization; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). NADP-malic enzyme 2 The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME2 is presumably a cytosolic enzyme involved in malate metabolism and possibly assisting the oxidative pentose phosphate pathway. AtNADP-ME2 counts for the major part of NADP-ME activity in mature tissues of Arabidopsis. | 5 | + | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00056G00850 | No description available. | scaffold00056 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR03G04470 | No description available. | A03 | + | View |
BR02G05640 | No description available. | A02 | + | View |
BR06G26800 | No description available. | A06 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV2G15760 | No description available. | Bvchr2.sca003 | - | View |
BV8G05330 | No description available. | Bvchr8.sca018 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL08G11870 | No description available. | Chr8 | - | View |
CL00G06280 | No description available. | Chr0 | + | View |
CL03G15830 | No description available. | Chr3 | - | View |
CL07G12890 | No description available. | Chr7 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00018G02330 | No description available. | CM3.5_scaffold00018 | + | View |
CM00067G02260 | No description available. | CM3.5_scaffold00067 | - | View |
CM00025G02000 | No description available. | CM3.5_scaffold00025 | + | View |
CM00014G04930 | No description available. | CM3.5_scaffold00014 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00007G02060 | No description available. | supercontig_7 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_006G09900 | No description available. | scaffold_6 | + | View |
CRU_006G22940 | No description available. | scaffold_6 | + | View |
CRU_003G32860 | No description available. | scaffold_3 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00005G01270 | No description available. | scaffold00005 | + | View |
CS00027G00460 | No description available. | scaffold00027 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0006G25860 | No description available. | scaffold_6 | + | View |
EG0003G04850 | No description available. | scaffold_3 | + | View |
EG0010G25040 | No description available. | scaffold_10 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV2G34830 | NADP-dependent malic enzyme (NADP-ME) (putative) | LG2 | - | View |
FV6G15180 | NADP-dependent malic enzyme, chloroplastic (NADP-ME), Precursor (similar to) | LG6 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM13G43130 | No description available. | Gm13 | - | View |
GM07G01851 | No description available. | Gm07 | - | View |
GM01G01180 | No description available. | Gm01 | - | View |
GM15G02230 | No description available. | Gm15 | + | View |
GM05G35800 | No description available. | Gm05 | + | View |
GM08G21530 | No description available. | Gm08 | - | View |
GM08G03840 | No description available. | Gm08 | - | View |
GM04G09110 | No description available. | Gm04 | + | View |
GM06G09220 | No description available. | Gm06 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ1G028760 | No description available. | chr1 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD15G013850 | No description available. | 15 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME07402G00130 | No description available. | scaffold07402 | - | View |
ME05875G00040 | No description available. | scaffold05875 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT3G110330 | NADP-dependent malic enzyme-like protein | chr3 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_003G04500 | No description available. | scaffold_3 | - | View |
PPE_007G24040 | No description available. | scaffold_7 | - | View |
PPE_001G44970 | No description available. | scaffold_1 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT06G23650 | No description available. | Chr06 | - | View |
PT01G18970 | No description available. | Chr01 | + | View |
PT03G04930 | No description available. | Chr03 | - | View |
PT18G04660 | No description available. | Chr18 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29912G01710 | No description available. | 29912 | - | View |
RC29794G01030 | No description available. | 29794 | + | View |
RC30146G00870 | No description available. | 30146 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL12G008430 | Malic enzyme (AHRD V1 ***- Q006Q0_TOBAC)%3B contains Interpro domain(s) IPR012302 Malic enzyme%2C NAD-binding | ch12 | + | View |
SL08G066290 | Malic enzyme (AHRD V1 ***- O04935_SOLLC)%3B contains Interpro domain(s) IPR016040 NAD(P)-binding domain | ch08 | + | View |
SL03G120990 | Malic enzyme (AHRD V1 ***- O04935_SOLLC)%3B contains Interpro domain(s) IPR012302 Malic enzyme%2C NAD-binding | ch03 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST08G015720 | Malic enzyme (AHRD V1 ***- B9RKI6_RICCO); contains Interpro domain(s) IPR012302 Malic enzyme, NAD-binding | chr08 | - | View |
ST12G022410 | Malic enzyme (AHRD V1 ***- O04935_SOLLC); contains Interpro domain(s) IPR012302 Malic enzyme, NAD-binding | chr12 | + | View |
ST03G035970 | Malic enzyme (AHRD V1 ***- Q006P9_TOBAC); contains Interpro domain(s) IPR012302 Malic enzyme, NAD-binding | chr03 | - | View |
ST12G009580 | Malic enzyme (AHRD V1 ***- Q006Q0_TOBAC); contains Interpro domain(s) IPR012302 Malic enzyme, NAD-binding | chr12 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0009G04460 | No description available. | scaffold_9 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G31940 | similar to AT5G11670|ATNADP-ME2 (NADP-malic enzyme 2) | ch6-6 | - | View |
TP2G21770 | similar to AT5G25880|ATNADP-ME3 (NADP-malic enzyme 3) | ch2-4 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV11G04560 | name=GSVIVG01015311001; NADP-dependent malic enzyme | chr11 | - | View |
VV09G04390 | name=GSVIVG01016997001; | chr9 | - | View |
VV04G07400 | name=GSVIVG01035291001; | chr4 | + | View |