Anchorpoints

Gene id
GR09G04860
Organism
Gossypium raimondii

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
GR03G06180No description available.Chr03-View
GR10G10510No description available.Chr10-View
GR11G07140No description available.Chr11-View
GR01G02620No description available.Chr01-View
GR01G00890No description available.Chr01+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G36270No description available.scaffold_3+View
AL6G26060No description available.scaffold_6+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G25880NADP-malic enzyme 3 NADP-malic enzyme 3 (NADP-ME3); FUNCTIONS IN: malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity, oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor, malic enzyme activity; INVOLVED IN: N-terminal protein myristoylation, malate metabolic process, protein homooligomerization; LOCATED IN: cytosol; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 2 (TAIR:AT5G11670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). The malic enzyme (EC 1.1.1.40) encoded by the ATNADP-ME3 is presumably cytosolic and restricted in its expression by both developmental and cell-specific signals.5+View
AT2G19900NADP-malic enzyme 1 NADP-malic enzyme 1 (NADP-ME1); FUNCTIONS IN: malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity, oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor, malic enzyme activity; INVOLVED IN: malate metabolic process, protein homooligomerization; LOCATED IN: cytosol; EXPRESSED IN: embryo, sperm cell, root, stamen, seed; EXPRESSED DURING: 4 anthesis, D bilateral stage; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 9392 Blast hits to 9373 proteins in 2414 species: Archae - 143; Bacteria - 6244; Metazoa - 609; Fungi - 220; Plants - 469; Viruses - 0; Other Eukaryotes - 1707 (source: NCBI BLink). The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME1 is expressed in response to developmental and cell-specific signals. The enzyme is active in vitro and appears to function as a homohexamer or homooctamer. It is believed to be a cytosolic protein.2-View
AT5G11670NADP-malic enzyme 2 (NADP-ME2); FUNCTIONS IN: malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity, oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor, malic enzyme activity; INVOLVED IN: response to cadmium ion, malate metabolic process, pentose-phosphate shunt, oxidative branch, protein homooligomerization; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). NADP-malic enzyme 2 The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME2 is presumably a cytosolic enzyme involved in malate metabolism and possibly assisting the oxidative pentose phosphate pathway. AtNADP-ME2 counts for the major part of NADP-ME activity in mature tissues of Arabidopsis.5+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00056G00850No description available.scaffold00056+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G04470No description available.A03+View
BR02G05640No description available.A02+View
BR06G26800No description available.A06+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV2G15760No description available.Bvchr2.sca003-View
BV8G05330No description available.Bvchr8.sca018+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL08G11870No description available.Chr8-View
CL00G06280No description available.Chr0+View
CL03G15830No description available.Chr3-View
CL07G12890No description available.Chr7-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00018G02330No description available.CM3.5_scaffold00018+View
CM00067G02260No description available.CM3.5_scaffold00067-View
CM00025G02000No description available.CM3.5_scaffold00025+View
CM00014G04930No description available.CM3.5_scaffold00014-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00007G02060No description available.supercontig_7-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G09900No description available.scaffold_6+View
CRU_006G22940No description available.scaffold_6+View
CRU_003G32860No description available.scaffold_3-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00005G01270No description available.scaffold00005+View
CS00027G00460No description available.scaffold00027+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G25860No description available.scaffold_6+View
EG0003G04850No description available.scaffold_3+View
EG0010G25040No description available.scaffold_10-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G34830NADP-dependent malic enzyme (NADP-ME) (putative)LG2-View
FV6G15180NADP-dependent malic enzyme, chloroplastic (NADP-ME), Precursor (similar to)LG6-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM13G43130No description available.Gm13-View
GM07G01851No description available.Gm07-View
GM01G01180No description available.Gm01-View
GM15G02230No description available.Gm15+View
GM05G35800No description available.Gm05+View
GM08G21530No description available.Gm08-View
GM08G03840No description available.Gm08-View
GM04G09110No description available.Gm04+View
GM06G09220No description available.Gm06+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G028760No description available.chr1+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD15G013850No description available.15+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07402G00130No description available.scaffold07402-View
ME05875G00040No description available.scaffold05875+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G110330NADP-dependent malic enzyme-like proteinchr3+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G04500No description available.scaffold_3-View
PPE_007G24040No description available.scaffold_7-View
PPE_001G44970No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT06G23650No description available.Chr06-View
PT01G18970No description available.Chr01+View
PT03G04930No description available.Chr03-View
PT18G04660No description available.Chr18+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29912G01710No description available.29912-View
RC29794G01030No description available.29794+View
RC30146G00870No description available.30146-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL12G008430Malic enzyme (AHRD V1 ***- Q006Q0_TOBAC)%3B contains Interpro domain(s) IPR012302 Malic enzyme%2C NAD-bindingch12+View
SL08G066290Malic enzyme (AHRD V1 ***- O04935_SOLLC)%3B contains Interpro domain(s) IPR016040 NAD(P)-binding domainch08+View
SL03G120990Malic enzyme (AHRD V1 ***- O04935_SOLLC)%3B contains Interpro domain(s) IPR012302 Malic enzyme%2C NAD-bindingch03+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST08G015720Malic enzyme (AHRD V1 ***- B9RKI6_RICCO); contains Interpro domain(s) IPR012302 Malic enzyme, NAD-bindingchr08-View
ST12G022410Malic enzyme (AHRD V1 ***- O04935_SOLLC); contains Interpro domain(s) IPR012302 Malic enzyme, NAD-bindingchr12+View
ST03G035970Malic enzyme (AHRD V1 ***- Q006P9_TOBAC); contains Interpro domain(s) IPR012302 Malic enzyme, NAD-bindingchr03-View
ST12G009580Malic enzyme (AHRD V1 ***- Q006Q0_TOBAC); contains Interpro domain(s) IPR012302 Malic enzyme, NAD-bindingchr12+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G04460No description available.scaffold_9+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G31940similar to AT5G11670|ATNADP-ME2 (NADP-malic enzyme 2)ch6-6-View
TP2G21770similar to AT5G25880|ATNADP-ME3 (NADP-malic enzyme 3)ch2-4-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV11G04560name=GSVIVG01015311001; NADP-dependent malic enzymechr11-View
VV09G04390name=GSVIVG01016997001;chr9-View
VV04G07400name=GSVIVG01035291001;chr4+View


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Gene id
Species
Description
Chromosome
Strand