Anchorpoints

Gene id
GR04G21360
Organism
Gossypium raimondii

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
GR07G10120No description available.Chr07-View
GR03G15720No description available.Chr03+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G18740No description available.scaffold_7+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G00335RING-H2 finger B1A (RHB1A); FUNCTIONS IN: zinc ion binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41350.1); Has 5425 Blast hits to 5419 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 1535; Fungi - 417; Plants - 2568; Viruses - 6; Other Eukaryotes - 899 (source: NCBI BLink). RING-H2 finger B1A4+View
AT5G41350RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger B1A (TAIR:AT4G00335.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). RING/U-box superfamily protein5-View
AT4G23450AtAIRP1 gene encodes a C3H2C3-type RING E3 Ub ligase. It has been shown to be a positive regulator in the Arabidopsis ABA-dependent drought response. RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41350.1).4-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G01890No description available.A09-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV1G06330No description available.Bvchr1.sca001+View
BV5G07280No description available.Bvchr5.sca002+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G02350No description available.Chr1+View
CL05G01700No description available.Chr5+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00006G01790No description available.CM3.5_scaffold00006+View
CM00005G06660No description available.CM3.5_scaffold00005-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00011G00320No description available.supercontig_11-View
CP00214G00080No description available.supercontig_214+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G35650No description available.scaffold_6-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00009G01170No description available.scaffold00009-View
CS00001G03330No description available.scaffold00001-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0005G05510No description available.scaffold_5-View
EG0005G01090No description available.scaffold_5+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G03180E3 ubiquitin-protein ligase At3g02290 (probable)LG5-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM01G42991No description available.Gm01-View
GM05G37620No description available.Gm05+View
GM09G39300No description available.Gm09+View
GM08G01960No description available.Gm08-View
GM07G07500No description available.Gm07+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G036130No description available.chr2-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G030510anaphase-promoting complex subunit 11 RING-H2 finger proteinchr8+View
MT8G098665anaphase-promoting complex subunit 11 RING-H2 finger proteinchr8-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G11220No description available.scaffold_5-View
PPE_002G16870No description available.scaffold_2-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G12990No description available.Chr03-View
PT02G16150No description available.Chr02-View
PT01G10170No description available.Chr01+View
PT14G08700No description available.Chr14-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30190G04140No description available.30190-View
RC30174G03090No description available.30174-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G094840RING finger protein 13 (AHRD V1 *-*- RNF13_RAT)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech01-View
SL08G081300Ring finger protein 126 (AHRD V1 *-*- Q28DW8_XENTR)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech08-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST08G029120E3 ubiquitin-protein ligase At3g02290 (AHRD V1 *--- RING3_ARATH); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr08+View
ST01G032230RING finger protein 44 (AHRD V1 *--- RNF44_HUMAN); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr01-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G27770No description available.scaffold_3-View
TC0001G35360No description available.scaffold_1+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G00590similar to AT5G41350|zinc finger (C3HC4-type RING finger) family proteinch7-1+View
TP7G21350similar to AT4G23450|zinc finger (C3HC4-type RING finger) family proteinch7-4-View


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Gene id
Species
Description
Chromosome
Strand