Anchorpoints

Gene id
GM20G33480
Organism
Glycine max

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
GM10G06760No description available.Gm10+View
GM13G20950No description available.Gm13+View
GM10G34100No description available.Gm10+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G03660No description available.scaffold_6-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G59820RESPONSIVE TO HIGH LIGHT 41 (RHL41); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: in 11 processes; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G46080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). C2H2-type zinc finger family protein Encodes a zinc finger protein involved in high light and cold acclimation. Overexpression of this putative transcription factor increases the expression level of 9 cold-responsive genes and represses the expression level of 15 cold-responsive genes, including CBF genes. Also, lines overexpressing this gene exhibits a small but reproducible increase in freeze tolerance. Because of the repression of the CBF genes by the overexpression of this gene, the authors speculate that this gene may be involved in negative regulatory circuit of the CBF pathway.5+View
AT5G04340zinc finger of Arabidopsis thaliana 6 (ZAT6); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: salt tolerance zinc finger (TAIR:AT1G27730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). zinc finger of Arabidopsis thaliana 6 putative c2h2 zinc finger transcription factor mRNA,5-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR10G12550No description available.A10+View
BR10G27230No description available.A10-View
BR01G38480No description available.A01-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G22450No description available.Chr5+View
CL08G07710No description available.Chr8+View
CL10G17950No description available.Chr10-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00016G07370No description available.CM3.5_scaffold00016-View
CM00011G03080No description available.CM3.5_scaffold00011+View
CM00040G00770No description available.CM3.5_scaffold00040+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00053G01610No description available.supercontig_53+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G03190No description available.scaffold_6-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00300G00100No description available.scaffold00300+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0007G21570No description available.scaffold_7-View
EG0001G13350No description available.scaffold_1-View
EG0002G33060No description available.scaffold_2-View
EG0010G09180No description available.scaffold_10-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G32590Zinc finger protein 1 (similar to)LG7-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR11G23440No description available.Chr11-View
GR06G16120No description available.Chr06-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ5G029280No description available.chr5+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G090703C2H2-type zinc finger proteinchr1+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G26440No description available.scaffold_2-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G22940No description available.Chr10+View
PT08G03230No description available.Chr08-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29589G00440No description available.29589+View
RC29475G00100No description available.29475-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G055500Cys2/His2 zinc-finger transcription factor (AHRD V1 *-** Q4U318_SILLA)%3B contains Interpro domain(s) IPR007087 Zinc finger%2C C2H2-typech05-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST05G028690Cys2/His2 zinc-finger transcription factor (AHRD V1 *-** Q4U318_SILLA); contains Interpro domain(s) IPR007087 Zinc finger, C2H2-typechr05-View
ST06G030860Cys2/His2 zinc-finger transcription factor (AHRD V1 **** Q4U318_SILLA); contains Interpro domain(s) IPR007087 Zinc finger, C2H2-typechr06+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0010G08380No description available.scaffold_10r+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G21500similar to AT5G59820|RHL41 (RESPONSIVE TO HIGH LIGHT 41)ch6-6+View
TP6G38340similar to AT5G04390|zinc finger (C2H2 type) family proteinch6-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G08790name=GSVIVG01031461001;chr6+View
VV13G02480name=GSVIVG01016182001;chr13+View


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Gene id
Species
Description
Chromosome
Strand