Anchorpoints
- Gene id
- GM14G40650
- Organism
- Glycine max
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM06G02970 | No description available. | Gm06 | - | View |
GM04G02960 | No description available. | Gm04 | - | View |
GM17G37430 | No description available. | Gm17 | + | View |
GM01G37370 | No description available. | Gm01 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL2G24490 | No description available. | scaffold_2 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G75540 | Encodes a B-box zinc finger transcription factor BBX21 (also named STH2/salt tolerance homolog2 and LHUS/long hypocotyl under shade). Interacts with COP1 to control de-etiolation. Also genetically interacts with COP1 to regulate shade avoidance. salt tolerance homolog2 salt tolerance homolog2 (STH2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT4G39070.1); Has 3177 Blast hits to 2249 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 43; Plants - 2068; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). | 1 | + | View |
AT2G21320 | B-box zinc finger family protein B-box zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT4G38960.1); Has 1943 Blast hits to 1369 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 0; Plants - 1819; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). | 2 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR02G23230 | No description available. | A02 | + | View |
BR07G30830 | No description available. | A07 | + | View |
BR07G19890 | No description available. | A07 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV1G08190 | No description available. | Bvchr1.sca001 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL08G14310 | No description available. | Chr8 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00014G03450 | No description available. | CM3.5_scaffold00014 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00140G00150 | No description available. | supercontig_140 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_002G21130 | No description available. | scaffold_2 | + | View |
CRU_004G00370 | No description available. | scaffold_4 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00002G05030 | No description available. | scaffold00002 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0006G13110 | No description available. | scaffold_6 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR09G19700 | No description available. | Chr09 | - | View |
GR05G11070 | No description available. | Chr05 | + | View |
GR10G00660 | No description available. | Chr10 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD12G015210 | No description available. | 12 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT3G113070 | salt tolerance-like protein | chr3 | + | View |
MT1G023260 | salt tolerance-like protein | chr1 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G37930 | No description available. | scaffold_1 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT05G23450 | No description available. | Chr05 | + | View |
PT02G02820 | No description available. | Chr02 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30170G04830 | No description available. | 30170 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL04G081020 | Zinc finger protein CONSTANS-LIKE 3 (AHRD V1 *--- COL3_ARATH)%3B contains Interpro domain(s) IPR000315 Zinc finger%2C B-box | ch04 | + | View |
SL12G089240 | Zinc finger protein CONSTANS-LIKE 3 (AHRD V1 *--- COL3_ARATH)%3B contains Interpro domain(s) IPR000315 Zinc finger%2C B-box | ch12 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST12G027420 | Zinc finger protein CONSTANS-LIKE 3 (AHRD V1 *--- COL3_ARATH); contains Interpro domain(s) IPR000315 Zinc finger, B-box | chr12 | + | View |
ST04G034410 | Zinc finger protein CONSTANS-LIKE 3 (AHRD V1 *--- COL3_ARATH); contains Interpro domain(s) IPR000315 Zinc finger, B-box | chr04 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0008G03580 | No description available. | scaffold_8 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP4G00500 | similar to AT2G21320|zinc finger (B-box type) family protein | ch4-1 | + | View |
TP5G30670 | similar to AT1G75540|STH2 (SALT TOLERANCE HOMOLOG2) | ch5-7 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV18G09880 | name=GSVIVG01009821001; | chr18 | + | View |