Anchorpoints
- Gene id
- GM13G16960
- Organism
- Glycine max
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM07G04310 | No description available. | Gm07 | + | View |
GM16G00980 | No description available. | Gm16 | + | View |
GM17G05760 | No description available. | Gm17 | - | View |
GM15G19510 | No description available. | Gm15 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL6G20940 | No description available. | scaffold_6 | - | View |
AL1G19920 | No description available. | scaffold_1 | - | View |
AL2G21400 | No description available. | scaffold_2 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G72610 | germin-like protein 1 germin-like protein 1 (GER1); INVOLVED IN: biological_process unknown; LOCATED IN: extracellular matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin 3 (TAIR:AT5G20630.1); Has 1559 Blast hits to 1557 proteins in 130 species: Archae - 0; Bacteria - 82; Metazoa - 0; Fungi - 43; Plants - 1420; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). germin-like protein (GLP1) | 1 | - | View |
AT1G74820 | RmlC-like cupins superfamily protein RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sepal; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT1G18980.1); Has 1566 Blast hits to 1545 proteins in 124 species: Archae - 0; Bacteria - 97; Metazoa - 0; Fungi - 33; Plants - 1424; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). | 1 | - | View |
AT5G20630 | Encodes a germin-like protein. Its transcripts are more abundant in RNA from leaves collected in the evening, suggesting some kind of circadian regulation. germin 3 (GER3); INVOLVED IN: response to cold, peptidyl-cysteine S-nitrosylation; LOCATED IN: extracellular matrix, apoplast, cell wall, nucleus, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 1 (TAIR:AT1G72610.1); Has 1486 Blast hits to 1484 proteins in 101 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 23; Plants - 1414; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). germin 3 | 5 | - | View |
AT1G18970 | germin-like protein 4 Encodes a germin-like protein with possible oxalate oxidase activity (based on GenBank record). germin-like protein 4 (GLP4); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT1G18980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | 1 | - | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00024G02410 | No description available. | scaffold00024 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR03G09030 | No description available. | A03 | - | View |
BR07G28710 | No description available. | A07 | - | View |
BR10G14670 | No description available. | A10 | + | View |
BR06G13610 | No description available. | A06 | - | View |
BR02G10260 | No description available. | A02 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV8G14560 | No description available. | Bvchr8.sca017 | + | View |
BV0G39830 | No description available. | 0039.scaffold00152 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL03G14800 | No description available. | Chr3 | - | View |
CL09G00670 | No description available. | Chr9 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00025G03130 | No description available. | CM3.5_scaffold00025 | + | View |
CM00067G01380 | No description available. | CM3.5_scaffold00067 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00028G00510 | No description available. | supercontig_28 | - | View |
CP00025G01180 | No description available. | supercontig_25 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G17810 | No description available. | scaffold_1 | - | View |
CRU_002G18360 | No description available. | scaffold_2 | - | View |
CRU_006G18440 | No description available. | scaffold_6 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00032G00470 | No description available. | scaffold00032 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV1G10120 | Auxin-binding protein ABP19a, Precursor (putative) | LG1 | + | View |
FV0G15650 | Auxin-binding protein ABP19a, Precursor (putative) | scf0513160 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR09G03550 | No description available. | Chr09 | + | View |
GR01G01540 | No description available. | Chr01 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ6G016190 | No description available. | chr6 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD15G016480 | No description available. | 15 | - | View |
MD13G026140 | No description available. | 13 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME05875G01070 | No description available. | scaffold05875 | + | View |
ME10493G00470 | No description available. | scaffold10493 | - | View |
ME12525G00150 | No description available. | scaffold12525 | - | View |
ME01782G00070 | No description available. | scaffold01782 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT2G041550 | auxin-binding protein ABP19a | chr2 | + | View |
MT8G020590 | auxin-binding protein ABP19a | chr8 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS08G35750 | Cupin domain containing protein, expressed Germin-like protein 8-13 | 8 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_007G21990 | Auxin-binding protein ABP20 | scaffold_7 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT06G14260 | No description available. | Chr06 | - | View |
PT03G06530 | No description available. | Chr03 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29739G02040 | No description available. | 29739 | - | View |
RC29706G00120 | No description available. | 29706 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL07G041720 | Oxalate oxidase-like germin 171 (AHRD V1 **** Q9FPQ0_BETVU)%3B contains Interpro domain(s) IPR014710 RmlC-like jelly roll fold | ch07 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST07G014810 | Oxalate oxidase-like germin 171 (AHRD V1 **** Q9FPQ0_BETVU); contains Interpro domain(s) IPR014710 RmlC-like jelly roll fold | chr07 | + | View |
ST03G034540 | Oxalate oxidase-like germin 171 (AHRD V1 **** Q9FPQ0_BETVU); contains Interpro domain(s) IPR014710 RmlC-like jelly roll fold | chr03 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0009G07450 | No description available. | scaffold_9 | - | View |
TC0006G11970 | No description available. | scaffold_6 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP5G27670 | similar to AT1G72610|GER1 (GERMIN-LIKE PROTEIN 1) | ch5-6 | - | View |
TP1G16930 | similar to AT1G18980|germin-like protein, putative | ch1-1 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV09G02460 | name=GSVIVG01016761001; | chr9 | - | View |