PLAZA 3.0 Dicots : colinear gene pairs

Anchorpoints

Gene id: GM10G40150
Organism: Glycine max

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
GM20G27280	No description available.	Gm20	+	View

Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id	Description	Chromosome	Strand	Multiplicon
AL1G44410	No description available.	scaffold_1	+	View
AL3G21290	No description available.	scaffold_3	+	View

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT1G50010	tubulin alpha-2 chain Encodes alpha-2,4 tubulin. TUA2 and TUA4 encode identical proteins. tubulin alpha-2 chain (TUA2); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: microtubule-based process, response to salt stress; LOCATED IN: tubulin complex, cytosol, cell wall, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-4 chain (TAIR:AT1G04820.1); Has 22626 Blast hits to 22529 proteins in 4679 species: Archae - 4; Bacteria - 25; Metazoa - 4391; Fungi - 13400; Plants - 1532; Viruses - 0; Other Eukaryotes - 3274 (source: NCBI BLink).	1	+	View

Brassica rapa

Gene id	Description	Chromosome	Strand	Multiplicon
BR08G03140	No description available.	A08	-	View

Citrullus lanatus

Gene id	Description	Chromosome	Strand	Multiplicon
CL02G07210	No description available.	Chr2	+	View
CL10G08260	No description available.	Chr10	-	View

Cucumis melo

Gene id	Description	Chromosome	Strand	Multiplicon
CM00031G05100	No description available.	CM3.5_scaffold00031	+	View
CM00034G01480	No description available.	CM3.5_scaffold00034	+	View

Capsella rubella

Gene id	Description	Chromosome	Strand	Multiplicon
CRU_001G37260	No description available.	scaffold_1	+	View

Citrus sinensis

Gene id	Description	Chromosome	Strand	Multiplicon
CS00236G00160	No description available.	scaffold00236	-	View

Eucalyptus grandis

Gene id	Description	Chromosome	Strand	Multiplicon
EG0007G08660	No description available.	scaffold_7	-	View

Gossypium raimondii

Gene id	Description	Chromosome	Strand	Multiplicon
GR12G14700	No description available.	Chr12	-	View
GR05G22960	No description available.	Chr05	-	View

Medicago truncatula

Gene id	Description	Chromosome	Strand	Multiplicon
MT1G106005	tubulin beta-1 chain	chr1	-	View

Prunus persica

Gene id	Description	Chromosome	Strand	Multiplicon
PPE_008G16880	No description available.	scaffold_8	+	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT09G08510	No description available.	Chr09	-	View
PT01G28950	No description available.	Chr01	-	View

Ricinus communis

Gene id	Description	Chromosome	Strand	Multiplicon
RC30099G00690	No description available.	30099	-	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL12G088180	Tubulin alpha-7 chain (AHRD V1 ***- B9IJV8_POPTR)%3B contains Interpro domain(s) IPR002452 Alpha tubulin	ch12	+	View

Solanum tuberosum

Gene id	Description	Chromosome	Strand	Multiplicon
ST12G026260	Tubulin alpha-5 chain (AHRD V1 ***- B9HN26_POPTR); contains Interpro domain(s) IPR002452 Alpha tubulin	chr12	+	View

Theobroma cacao

Gene id	Description	Chromosome	Strand	Multiplicon
TC0002G11540	No description available.	scaffold_2	+	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
VV03G09220	name=GSVIVG01037046001;	chr3	+	View