Anchorpoints
- Gene id
- GM05G07943
- Organism
- Glycine max
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM04G22407 | No description available. | Gm04 | + | View |
GM17G13065 | No description available. | Gm17 | + | View |
GM06G23410 | No description available. | Gm06 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL3G20100 | No description available. | scaffold_3 | + | View |
AL2G17040 | No description available. | scaffold_2 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G18550 | TCP family transcription factor Encodes a TCP transcription factor, closely related to teosinte branched1, arrests axillary bud development and prevents axillary bud outgrowth. BRANCHED 1 (BRC1); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 12 (TAIR:AT1G68800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | 3 | + | View |
AT1G68800 | Encodes a TCP transcription factor, closely related to teosinte branched1, arrests axillary bud development and prevents axillary bud outgrowth. Transcription level and mutant phenotype are weaker than its homolog BRC1 (At3G18550). TCP domain protein 12 TCP domain protein 12 (TCP12); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G67260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | 1 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR03G35550 | No description available. | A03 | + | View |
BR01G31050 | No description available. | A01 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV6G21410 | No description available. | Bvchr6.sca007 | + | View |
BV0G58730 | No description available. | 0083.scaffold00282 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL06G15570 | No description available. | Chr6 | - | View |
CL04G11130 | No description available. | Chr4 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00030G02150 | No description available. | CM3.5_scaffold00030 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00013G00460 | No description available. | supercontig_13 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_003G17520 | No description available. | scaffold_3 | + | View |
CRU_002G14470 | No description available. | scaffold_2 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00035G00440 | No description available. | scaffold00035 | - | View |
CS00019G00800 | No description available. | scaffold00019 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0007G17990 | No description available. | scaffold_7 | + | View |
EG0011G22150 | No description available. | scaffold_11 | - | View |
EG0002G06030 | No description available. | scaffold_2 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV5G10770 | Transcription factor TCP18 (probable) | LG5 | + | View |
FV0G02480 | Transcription factor CYCLOIDEA (similar to) | scf0513158 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR08G28530 | No description available. | Chr08 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD06G017560 | No description available. | 6 | - | View |
MD13G003090 | No description available. | 13 | + | View |
MD14G020750 | No description available. | 14 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME07762G00370 | No description available. | scaffold07762 | - | View |
ME08359G00590 | No description available. | scaffold08359 | + | View |
ME06656G00110 | No description available. | scaffold06656 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT4G111935 | TCP family transcription factor | chr4 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G31490 | No description available. | scaffold_1 | - | View |
PPE_005G21980 | No description available. | scaffold_5 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT12G05990 | No description available. | Chr12 | - | View |
PT15G05050 | No description available. | Chr15 | + | View |
PT08G11580 | No description available. | Chr08 | - | View |
PT10G13020 | No description available. | Chr10 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30174G04010 | No description available. | 30174 | + | View |
RC29738G00420 | No description available. | 29738 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL05G009900 | CYCLOIDEA-like group 1B protein (Fragment) (AHRD V1 *-*- Q6VM71_LUPDI)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCP | ch05 | + | View |
SL03G119770 | CYCLOIDEA-like (Fragment) (AHRD V1 *-*- Q2TKW2_9DIPS)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCP | ch03 | + | View |
SL06G069240 | Teosinte-branched-like protein (Fragment) (AHRD V1 *-*- Q9FNU7_POPTR)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCP | ch06 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST06G026160 | Teosinte-branched-like protein (Fragment) (AHRD V1 *-*- Q9FNU7_POPTR); contains Interpro domain(s) IPR005333 Transcription factor, TCP | chr06 | + | View |
ST05G007420 | Cycloidea-like protein group 1A (Fragment) (AHRD V1 *-*- Q19C88_LUPHI); contains Interpro domain(s) IPR005333 Transcription factor, TCP | chr05 | - | View |
ST03G033320 | CYCLOIDEA-like (Fragment) (AHRD V1 *-*- Q2TKW8_9DIPS); contains Interpro domain(s) IPR005333 Transcription factor, TCP | chr03 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0002G35950 | No description available. | scaffold_2 | + | View |
TC0003G02650 | No description available. | scaffold_3 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP3G16630 | similar to AT3G18550|BRC1 (BRANCHED 1) | ch3-1 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV17G05570 | name=GSVIVG01008234001; | chr17 | + | View |
VV01G08300 | name=GSVIVG01011962001; | chr1 | - | View |