Anchorpoints
- Gene id
- GM05G01481
- Organism
- Glycine max
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM11G07013 | No description available. | Gm11 | - | View |
GM08G40580 | No description available. | Gm08 | + | View |
GM04G34450 | No description available. | Gm04 | + | View |
GM06G20160 | No description available. | Gm06 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL1G19860 | No description available. | scaffold_1 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G18900 | Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G74750.1). | 1 | + | View |
AT1G10270 | glutamine-rich protein 23 (GRP23); FUNCTIONS IN: binding; INVOLVED IN: embryo development, cell division; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G49240.1); Has 43483 Blast hits to 18975 proteins in 889 species: Archae - 27; Bacteria - 1738; Metazoa - 7010; Fungi - 2820; Plants - 24944; Viruses - 157; Other Eukaryotes - 6787 (source: NCBI BLink). glutamine-rich protein 23 | 1 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR10G20040 | No description available. | A10 | + | View |
BR08G25610 | No description available. | A08 | - | View |
BR06G13540 | No description available. | A06 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV5G01350 | No description available. | Bvchr5.sca023 | + | View |
BV6G15450 | No description available. | Bvchr6.sca004 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL05G08580 | No description available. | Chr5 | - | View |
CL06G17000 | No description available. | Chr6 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00014G00560 | No description available. | supercontig_14 | + | View |
CP00005G02850 | No description available. | supercontig_5 | - | View |
CP00017G02090 | No description available. | supercontig_17 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_007G34410 | No description available. | scaffold_7 | - | View |
CRU_001G17770 | No description available. | scaffold_1 | + | View |
CRU_001G09250 | No description available. | scaffold_1 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00009G00140 | No description available. | scaffold00009 | - | View |
CS00015G01090 | No description available. | scaffold00015 | - | View |
CS00015G01910 | No description available. | scaffold00015 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0003G18750 | No description available. | scaffold_3 | - | View |
EG0010G18580 | No description available. | scaffold_10 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV0G06400 | Pentatricopeptide repeat-containing protein At1g71060, mitochondrial, Precursor (putative) | scf0513158 | + | View |
FV5G18530 | Pentatricopeptide repeat-containing protein At1g74750 (similar to) | LG5 | - | View |
FV1G27100 | Pentatricopeptide repeat-containing protein At2g31400, chloroplastic, Precursor (similar to) | LG1 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR05G18920 | No description available. | Chr05 | + | View |
GR07G03500 | No description available. | Chr07 | - | View |
GR02G24330 | No description available. | Chr02 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD14G018570 | No description available. | 14 | + | View |
MD16G004450 | No description available. | 16 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME04209G00190 | No description available. | scaffold04209 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT3G037490 | PPR containing plant-like protein | chr3 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_003G25230 | No description available. | scaffold_3 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT15G06640 | No description available. | Chr15 | + | View |
PT08G08300 | No description available. | Chr08 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29822G01240 | No description available. | 29822 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL03G113380 | Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7KS48_ARALY)%3B contains Interpro domain(s) IPR002625 Smr protein/MutS2 C-terminal | ch03 | - | View |
SL02G087560 | Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7MJE2_ARALY)%3B contains Interpro domain(s) IPR002885 Pentatricopeptide repeat | ch02 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST02G035310 | Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7MJE2_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat | chr02 | - | View |
ST05G011690 | Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7M761_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat | chr05 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0004G07710 | No description available. | scaffold_4 | - | View |
TC0003G07900 | No description available. | scaffold_3 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G08860 | similar to AT1G10270|GRP23 (GLUTAMINE-RICH PROTEIN23) | ch1-1 | + | View |
TP1G16880 | similar to AT1G18900|pentatricopeptide (PPR) repeat-containing protein | ch1-1 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV17G04350 | name=GSVIVG01008078001; | chr17 | - | View |
VV14G12660 | name=GSVIVG01032591001; | chr14 | - | View |
VV01G12960 | name=GSVIVG01020108001; | chr1 | + | View |
VV01G07030 | name=GSVIVG01011807001; | chr1 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM06G17090 | No description available. | 6 | - | View |
ZM07G27550 | No description available. | 7 | - | View |