Anchorpoints

Gene id
GM03G33440
Organism
Glycine max

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
GM10G05560No description available.Gm10+View
GM13G19910No description available.Gm13+View
GM19G36170No description available.Gm19+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G01930No description available.scaffold_6+View
AL3G09800No description available.scaffold_3+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G09600Homeodomain-like superfamily protein Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: LHY/CCA1-like 1 (TAIR:AT5G02840.3); Has 1480 Blast hits to 1470 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 6; Plants - 1120; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). Encodes a MYB-like transcription factor similar to CIRCADIAN CLOCK-ASSOCIATED1 (CCA1) and ELONGATED HYPOCOTYL (LHY). Involved in the regulation of circadian clock by modulating the pattern of histone 3 (H3) acetylation.3+View
AT5G02840LHY/CCA1-like 1 (LCL1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G09600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). LHY/CCA1-like 1 CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis.5+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G00950No description available.A03-View
BR01G38900No description available.A01-View
BR10G28270No description available.A10-View
BR05G32600No description available.A05-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL10G18620No description available.Chr10-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00011G02310No description available.CM3.5_scaffold00011+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00114G00570No description available.supercontig_114-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G08310No description available.scaffold_3+View
CRU_006G01600No description available.scaffold_6+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00172G00030No description available.scaffold00172-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0001G09610No description available.scaffold_1-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G14680Myb-like protein G (probable)LG6+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ5G010180No description available.chr5+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD12G012160No description available.12-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G067000myb transcription factorchr1-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G25090No description available.scaffold_6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT06G13300No description available.Chr06+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29805G00280No description available.29805-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G084370MYB transcription factor (Fragment) (AHRD V1 **-- A1DR87_CATRO)%3B contains Interpro domain(s) IPR006447 Myb-like DNA-binding region%2C SHAQKYF classch10-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST10G024580MYB transcription factor (Fragment) (AHRD V1 **-* A1DR87_CATRO); contains Interpro domain(s) IPR006447 Myb-like DNA-binding region, SHAQKYF classchr10+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0005G05050No description available.scaffold_5+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G39740similar to AT5G02840|LCL1 (LHY/CCA1-like 1)ch6-6-View
TP3G07950similar to AT3G09600|myb family transcription factorch3-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G01740name=GSVIVG01025544001;chr8-View


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Description
Chromosome
Strand