Anchorpoints
- Gene id
- GM03G29070
- Organism
- Glycine max
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM10G15700 | Transcription initiation factor IIB | Gm10 | + | View |
GM19G31830 | No description available. | Gm19 | - | View |
GM02G32370 | Transcription initiation factor IIB | Gm02 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL4G28650 | No description available. | scaffold_4 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G57370 | Cyclin family protein Cyclin family protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin-like family protein (TAIR:AT3G10330.1); Has 1320 Blast hits to 1319 proteins in 324 species: Archae - 441; Bacteria - 0; Metazoa - 207; Fungi - 261; Plants - 140; Viruses - 3; Other Eukaryotes - 268 (source: NCBI BLink). | 3 | - | View |
AT2G41630 | transcription factor IIB (TFIIB); FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation, regulation of transcription; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Cyclin-like (InterPro:IPR011028), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Zinc finger, TFIIB-type (InterPro:IPR013137), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin-like family protein (TAIR:AT3G10330.1); Has 1967 Blast hits to 1965 proteins in 361 species: Archae - 538; Bacteria - 1; Metazoa - 305; Fungi - 294; Plants - 195; Viruses - 14; Other Eukaryotes - 620 (source: NCBI BLink). transcription factor IIB Encodes a transcription factor, TFIIB1, that plays important roles in pollen tube growth, guidance, and reception as well as endosperm development and is partially functionally different from AtTFIIB2 and AtTFIIB3/AtpBRP2. | 2 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR04G02850 | No description available. | A04 | + | View |
BR05G02220 | No description available. | A05 | - | View |
BR03G20800 | No description available. | A03 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV3G11610 | No description available. | Bvchr3.sca010 | + | View |
BV4G13270 | No description available. | Bvchr4.sca001 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL04G03440 | No description available. | Chr4 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00182G00040 | No description available. | supercontig_182 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_004G23050 | No description available. | scaffold_4 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0001G19510 | No description available. | scaffold_1 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR06G13610 | No description available. | Chr06 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD12G006460 | No description available. | 12 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME07087G00070 | No description available. | scaffold07087 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT7G091230 | transcription initiation factor IIB | chr7 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_007G06930 | No description available. | scaffold_7 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT06G04840 | No description available. | Chr06 | - | View |
PT16G05710 | No description available. | Chr16 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL10G079990 | Transcription initiation factor IIB-2 (AHRD V1 ***- D7L8X6_ARALY)%3B contains Interpro domain(s) IPR000812 Transcription factor TFIIB related | ch10 | - | View |
SL10G079360 | Transcription initiation factor IIB-2 (AHRD V1 ***- D7L8X6_ARALY)%3B contains Interpro domain(s) IPR000812 Transcription factor TFIIB related | ch10 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST10G021060 | Transcription initiation factor IIB-2 (AHRD V1 **** D7L8X6_ARALY); contains Interpro domain(s) IPR000812 Transcription factor TFIIB related | chr10 | - | View |
ST10G021760 | Transcription initiation factor IIB-2 (AHRD V1 ***- D7L8X6_ARALY); contains Interpro domain(s) IPR000812 Transcription factor TFIIB related | chr10 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0005G15230 | No description available. | scaffold_5 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP4G23870 | similar to AT2G41630|TFIIB (TRANSCRIPTION FACTOR II B) | ch4-6 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV08G07140 | name=GSVIVG01033246001; | chr8 | + | View |