Anchorpoints

Gene id
GM03G02580
Organism
Glycine max

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
GM16G32940No description available.Gm16+View
GM09G28080No description available.Gm09+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL5G31580No description available.scaffold_5+View
AL4G33340No description available.scaffold_4+View
AL8G15810No description available.scaffold_8-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G51590AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G25320.1); Has 1243 Blast hits to 1178 proteins in 110 species: Archae - 0; Bacteria - 11; Metazoa - 305; Fungi - 62; Plants - 787; Viruses - 15; Other Eukaryotes - 63 (source: NCBI BLink). AT hook motif DNA-binding family protein5-View
AT2G45430AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis. AT-hook motif nuclear-localized protein 222+View
AT3G60870Encodes an AT hook domain containing protein that, when overexpressed, delays flowering. AT-hook motif nuclear-localized protein 18 (AHL18); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 22 (TAIR:AT2G45430.1); Has 760 Blast hits to 756 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 758; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). AT-hook motif nuclear-localized protein 183+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00041G00080No description available.scaffold00041+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G05010No description available.A05+View
BR04G27040No description available.A04+View
BR01G02900No description available.A01-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV5G08720No description available.Bvchr5.sca002+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G02430No description available.Chr5-View
CL01G03300No description available.Chr1-View
CL06G00340No description available.Chr6-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00006G09470No description available.CM3.5_scaffold00006-View
CM00005G05590No description available.CM3.5_scaffold00005-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00018G01190No description available.supercontig_18+View
CP00029G00620No description available.supercontig_29-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G11420No description available.scaffold_8-View
CRU_005G26220No description available.scaffold_5+View
CRU_004G27070No description available.scaffold_4+View
CRU_007G14830No description available.scaffold_7-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0001G24480No description available.scaffold_1+View
EG0004G20290No description available.scaffold_4-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G10980Putative DNA-binding protein ESCAROLA (similar to)LG7-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G24070No description available.Chr08+View
GR04G20370No description available.Chr04-View
GR08G28360No description available.Chr08+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G035230No description available.chr2+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD02G019310No description available.2-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03942G00060No description available.scaffold03942+View
ME07035G00720No description available.scaffold07035-View
ME04882G00620No description available.scaffold04882-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G011520AT hook motif DNA-binding family proteinchr5-View
MT8G036060AT hook motif DNA-binding family proteinchr8-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G27030No description available.scaffold_2-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G14860No description available.Chr02-View
PT01G11520No description available.Chr01-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL08G079630AT-hook motif nuclear localized protein 1 (AHRD V1 ***- Q8VYJ2_ARATH)%3B contains Interpro domain(s) IPR005175 Protein of unknown function DUF296ch08-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST08G025490AT-hook DNA-binding protein (Fragment) (AHRD V1 *--* A1DR81_CATRO); contains Interpro domain(s) IPR014476 Predicted AT-hook DNA-bindingchr08+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G37090No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G27460similar to AT2G45430|DNA-binding protein-relatedch4-6+View
TP6G13830similar to AT5G51590|DNA-binding protein-relatedch6-6-View
TP7G23340similar to AT4G25320|DNA-binding protein-relatedch7-4+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV15G08970name=GSVIVG01027625001;chr15-View
VV02G07900name=GSVIVG01019932001;chr2-View


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Description
Chromosome
Strand