PLAZA 3.0 Dicots : colinear gene pairs

Anchorpoints

Gene id: GM02G41040
Organism: Glycine max

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
GM14G39330	No description available.	Gm14	-	View

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT5G37500	Encodes a guard cell outward potassium channel. Belongs to the Shaker family K+ channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mutants have increased water consumption and limited stomatal closure in response to abscisic and jasmonic acids. It forms a heteromeric K(out) channels with SKOR. The gene is expressed ubiquitously in root and the vasculature and guard cells of leaves. Expression is suppressed during agrobacterium-induced tumor formation and increased in response to water deprivation and cold. gated outwardly-rectifying K+ channel gated outwardly-rectifying K+ channel (GORK); FUNCTIONS IN: outward rectifier potassium channel activity, cyclic nucleotide binding, protein binding; INVOLVED IN: response to jasmonic acid stimulus, response to water deprivation, response to cold, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: STELAR K+ outward rectifier (TAIR:AT3G02850.1); Has 84212 Blast hits to 35106 proteins in 1650 species: Archae - 146; Bacteria - 9486; Metazoa - 40206; Fungi - 7878; Plants - 3819; Viruses - 1287; Other Eukaryotes - 21390 (source: NCBI BLink).	5	-	View

Carica papaya

Gene id	Description	Chromosome	Strand	Multiplicon
CP00116G00820	No description available.	supercontig_116	+	View
CP00003G03580	No description available.	supercontig_3	-	View

Capsella rubella

Gene id	Description	Chromosome	Strand	Multiplicon
CRU_007G31290	No description available.	scaffold_7	-	View

Eucalyptus grandis

Gene id	Description	Chromosome	Strand	Multiplicon
EG0006G24010	No description available.	scaffold_6	+	View

Fragaria vesca

Gene id	Description	Chromosome	Strand	Multiplicon
FV5G16260	Potassium channel SKOR (similar to)	LG5	-	View
FV1G28900	Potassium channel SKOR (similar to)	LG1	-	View

Malus domestica

Gene id	Description	Chromosome	Strand	Multiplicon
MD17G020400	No description available.	17	-	View
MD09G025160	No description available.	9	-	View

Manihot esculenta

Gene id	Description	Chromosome	Strand	Multiplicon
ME07520G00320	No description available.	scaffold07520	+	View

Medicago truncatula

Gene id	Description	Chromosome	Strand	Multiplicon
MT5G077770	potassium outward rectifying channel protein	chr5	-	View

Prunus persica

Gene id	Description	Chromosome	Strand	Multiplicon
PPE_003G14680	No description available.	scaffold_3	-	View
PPE_005G23770	No description available.	scaffold_5	+	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT04G08330	No description available.	Chr04	+	View
PT17G13540	No description available.	Chr17	-	View
PT12G04300	No description available.	Chr12	-	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL11G011500	Potassium channel (AHRD V1 ***- D0EM91_9ROSI)%3B contains Interpro domain(s) IPR002110 Ankyrin	ch11	+	View

Solanum tuberosum

Gene id	Description	Chromosome	Strand	Multiplicon
ST11G007920	Potassium channel (AHRD V1 **** D0EM91_9ROSI); contains Interpro domain(s) IPR002110 Ankyrin	chr11	-	View