Anchorpoints
- Gene id
- GM02G01010
- Organism
- Glycine max
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM19G40970 | No description available. | Gm19 | - | View |
GM10G27881 | No description available. | Gm10 | - | View |
GM03G38370 | No description available. | Gm03 | - | View |
GM17G04760 | No description available. | Gm17 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL7G29740 | No description available. | scaffold_7 | - | View |
AL4G35170 | No description available. | scaffold_4 | + | View |
AL3G18950 | No description available. | scaffold_3 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G46990 | indole-3-acetic acid inducible 20 (IAA20); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 30 (TAIR:AT3G62100.1); Has 1768 Blast hits to 1768 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1767; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). indole-3-acetic acid inducible 20 Encodes a member of the Aux/IAA family of proteins implicated in auxin signaling. IAA20 lacks the conserved degron (domain II) found in many family members, and IAA20 fusion proteins are stable in Arabidopsis seedlings. IAA20 transcripts are induced by auxin treatment, and overexpression of IAA20 leads to defects in gravitropism, root development, root meristem maintenance, etiolation, and cotyledon vascular development. | 2 | + | View |
AT3G62100 | indole-3-acetic acid inducible 30 Encodes a member of the Aux/IAA family of proteins implicated in auxin signaling. IAA30 lacks the conserved degron (domain II) found in many family members. IAA30 transcripts are induced by auxin treatment and accumulate preferentially in the quiescent center cells of the root meristem. Overexpression of IAA30 leads to defects in gravitropism, root development, root meristem maintenance, and cotyledon vascular development. Target of LEC2 and AGL15. Promotes somatyic embryogenesis. indole-3-acetic acid inducible 30 (IAA30); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: gravitropism, response to auxin stimulus, response to cyclopentenone, somatic embryogenesis, root development; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 20 (TAIR:AT2G46990.1); Has 1798 Blast hits to 1798 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1797; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | 3 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR09G41270 | No description available. | A09 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00057G00230 | No description available. | supercontig_57 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_003G22250 | No description available. | scaffold_3 | - | View |
CRU_005G27430 | No description available. | scaffold_5 | + | View |
CRU_004G28610 | No description available. | scaffold_4 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00001G05690 | No description available. | scaffold00001 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0011G04780 | No description available. | scaffold_11 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV4G18570 | Auxin-responsive protein IAA31 (similar to) | LG4 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR07G11770 | No description available. | Chr07 | - | View |
GR04G14750 | No description available. | Chr04 | - | View |
GR08G13400 | No description available. | Chr08 | + | View |
GR11G17070 | No description available. | Chr11 | - | View |
GR01G14810 | No description available. | Chr01 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ1G069810 | No description available. | chr1 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME07571G00490 | No description available. | scaffold07571 | + | View |
ME00080G00560 | No description available. | scaffold00080 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT1G085750 | auxin-responsive AUX/IAA family protein | chr1 | + | View |
MT7G110790 | auxin-responsive AUX/IAA family protein | chr7 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS12G40890 | Auxin-responsive protein IAA30 OsIAA30 - Auxin-responsive Aux/IAA gene family member, expressed | 12 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_010G00170 | No description available. | scaffold_10 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT14G11170 | No description available. | Chr14 | + | View |
PT02G18640 | No description available. | Chr02 | + | View |
PT05G05380 | No description available. | Chr05 | - | View |
PT13G04130 | No description available. | Chr13 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30076G01090 | No description available. | 30076 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G32410 | No description available. | scaffold_1 | - | View |
TC0005G28180 | No description available. | scaffold_5 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP5G01270 | similar to AT3G62100|IAA30 (INDOLE-3-ACETIC ACID INDUCIBLE 30) | ch5-1 | - | View |
TP4G28990 | similar to AT2G46990|IAA20 (INDOLE-3-ACETIC ACID INDUCIBLE 20) | ch4-6 | + | View |
TP2G08490 | similar to AT5G43700|ATAUX2-11 (AUXIN INDUCIBLE 2-11) | ch2-4 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV07G10280 | name=GSVIVG01028242001; | chr7 | + | View |
VV05G02700 | name=GSVIVG01017711001; | chr5 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM08G00180 | No description available. | 8 | - | View |
ZM03G10190 | No description available. | 3 | + | View |