Anchorpoints
- Gene id
- GM01G37393
- Organism
- Glycine max
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM04G01042 | No description available. | Gm04 | - | View |
GM11G07881 | No description available. | Gm11 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL3G39060 | No description available. | scaffold_3 | + | View |
AL5G20770 | No description available. | scaffold_5 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G51120 | DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Plus-3 domain, subgroup (InterPro:IPR018144), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), GYF (InterPro:IPR003169), SWIB/MDM2 domain (InterPro:IPR003121), Plus-3 (InterPro:IPR004343), SWIB domain (InterPro:IPR019835), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: nucleic acid binding;zinc ion binding;DNA binding (TAIR:AT2G16485.1); Has 2327 Blast hits to 1758 proteins in 258 species: Archae - 0; Bacteria - 308; Metazoa - 909; Fungi - 193; Plants - 493; Viruses - 18; Other Eukaryotes - 406 (source: NCBI BLink). | 3 | - | View |
AT2G18090 | PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), SWIB/MDM2 domain (InterPro:IPR003121), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), GYF (InterPro:IPR003169), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding (TAIR:AT3G51120.1); Has 1270 Blast hits to 1121 proteins in 190 species: Archae - 0; Bacteria - 166; Metazoa - 513; Fungi - 60; Plants - 433; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein | 2 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR09G09270 | No description available. | A09 | + | View |
BR09G32780 | No description available. | A09 | - | View |
BR03G41860 | No description available. | A03 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV6G16600 | No description available. | Bvchr6.sca002 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL02G04850 | No description available. | Chr2 | + | View |
CL07G10230 | No description available. | Chr7 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00019G03330 | No description available. | CM3.5_scaffold00019 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00006G02080 | No description available. | supercontig_6 | - | View |
CP00150G00240 | No description available. | supercontig_150 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_005G16390 | No description available. | scaffold_5 | - | View |
CRU_003G30990 | No description available. | scaffold_3 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00017G00670 | No description available. | scaffold00017 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0010G20720 | No description available. | scaffold_10 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV1G14090 | Zinc finger CCCH domain-containing protein 44 (AtC3H44) (probable) | LG1 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR03G01140 | No description available. | Chr03 | + | View |
GR07G04950 | No description available. | Chr07 | + | View |
GR05G24820 | No description available. | Chr05 | - | View |
GR07G19720 | No description available. | Chr07 | + | View |
GR11G09970 | No description available. | Chr11 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME02994G00190 | No description available. | scaffold02994 | + | View |
ME06512G00770 | No description available. | scaffold06512 | - | View |
ME07520G02350 | No description available. | scaffold07520 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT5G021450 | GYF domain protein | chr5 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_007G18580 | No description available. | scaffold_7 | - | View |
PPE_008G10340 | No description available. | scaffold_8 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT05G11730 | No description available. | Chr05 | + | View |
PT07G01590 | No description available. | Chr07 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL02G062360 | Histone-lysine N-methyltransferase NSD3 (AHRD V1 *--- NSD3_HUMAN)%3B contains Interpro domain(s) IPR018144 Plus-3 domain%2C subgroup | ch02 | + | View |
SL03G033630 | Zinc finger CCCH domain-containing protein 44 (AHRD V1 *--- C3H44_ARATH)%3B contains Interpro domain(s) IPR011011 Zinc finger%2C FYVE/PHD-type | ch03 | + | View |
SL02G084510 | Novel protein containing a PHD-finger domain (Fragment) (AHRD V1 *--- Q07G27_XENTR)%3B contains Interpro domain(s) IPR018144 Plus-3 domain%2C subgroup | ch02 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST02G027630 | SWIb domain-containing protein (Fragment) (AHRD V1 *--- Q6V9I4_SOLCH); contains Interpro domain(s) IPR018144 Plus-3 domain, subgroup | chr02 | + | View |
ST02G010030 | Zinc finger CCCH domain-containing protein 44 (AHRD V1 *--- C3H44_ARATH); contains Interpro domain(s) IPR018144 Plus-3 domain, subgroup | chr02 | + | View |
ST03G009340 | Zinc finger CCCH domain-containing protein 44 (AHRD V1 *--- C3H44_ARATH); contains Interpro domain(s) IPR011011 Zinc finger, FYVE/PHD-type | chr03 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G02180 | No description available. | scaffold_1 | + | View |
TC0002G07240 | No description available. | scaffold_2 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP3G31520 | similar to AT2G18090|PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein | ch3-6 | + | View |
TP5G11090 | similar to AT3G51120|DNA binding / nucleic acid binding / protein binding / zinc ion binding | ch5-1 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV03G05960 | name=GSVIVG01024181001; | chr3 | - | View |
VV04G01110 | name=GSVIVG01018827001; | chr4 | - | View |