Anchorpoints

Gene id
GM01G37393
Organism
Glycine max

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
GM04G01042No description available.Gm04-View
GM11G07881No description available.Gm11-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G39060No description available.scaffold_3+View
AL5G20770No description available.scaffold_5-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G51120DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Plus-3 domain, subgroup (InterPro:IPR018144), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), GYF (InterPro:IPR003169), SWIB/MDM2 domain (InterPro:IPR003121), Plus-3 (InterPro:IPR004343), SWIB domain (InterPro:IPR019835), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: nucleic acid binding;zinc ion binding;DNA binding (TAIR:AT2G16485.1); Has 2327 Blast hits to 1758 proteins in 258 species: Archae - 0; Bacteria - 308; Metazoa - 909; Fungi - 193; Plants - 493; Viruses - 18; Other Eukaryotes - 406 (source: NCBI BLink).3-View
AT2G18090PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), SWIB/MDM2 domain (InterPro:IPR003121), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), GYF (InterPro:IPR003169), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding (TAIR:AT3G51120.1); Has 1270 Blast hits to 1121 proteins in 190 species: Archae - 0; Bacteria - 166; Metazoa - 513; Fungi - 60; Plants - 433; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein2+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G09270No description available.A09+View
BR09G32780No description available.A09-View
BR03G41860No description available.A03-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G16600No description available.Bvchr6.sca002-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G04850No description available.Chr2+View
CL07G10230No description available.Chr7+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00019G03330No description available.CM3.5_scaffold00019+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00006G02080No description available.supercontig_6-View
CP00150G00240No description available.supercontig_150+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G16390No description available.scaffold_5-View
CRU_003G30990No description available.scaffold_3+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00017G00670No description available.scaffold00017-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G20720No description available.scaffold_10-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV1G14090Zinc finger CCCH domain-containing protein 44 (AtC3H44) (probable)LG1+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR03G01140No description available.Chr03+View
GR07G04950No description available.Chr07+View
GR05G24820No description available.Chr05-View
GR07G19720No description available.Chr07+View
GR11G09970No description available.Chr11+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02994G00190No description available.scaffold02994+View
ME06512G00770No description available.scaffold06512-View
ME07520G02350No description available.scaffold07520-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G021450GYF domain proteinchr5-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G18580No description available.scaffold_7-View
PPE_008G10340No description available.scaffold_8+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G11730No description available.Chr05+View
PT07G01590No description available.Chr07+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G062360Histone-lysine N-methyltransferase NSD3 (AHRD V1 *--- NSD3_HUMAN)%3B contains Interpro domain(s) IPR018144 Plus-3 domain%2C subgroupch02+View
SL03G033630Zinc finger CCCH domain-containing protein 44 (AHRD V1 *--- C3H44_ARATH)%3B contains Interpro domain(s) IPR011011 Zinc finger%2C FYVE/PHD-typech03+View
SL02G084510Novel protein containing a PHD-finger domain (Fragment) (AHRD V1 *--- Q07G27_XENTR)%3B contains Interpro domain(s) IPR018144 Plus-3 domain%2C subgroupch02+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G027630SWIb domain-containing protein (Fragment) (AHRD V1 *--- Q6V9I4_SOLCH); contains Interpro domain(s) IPR018144 Plus-3 domain, subgroupchr02+View
ST02G010030Zinc finger CCCH domain-containing protein 44 (AHRD V1 *--- C3H44_ARATH); contains Interpro domain(s) IPR018144 Plus-3 domain, subgroupchr02+View
ST03G009340Zinc finger CCCH domain-containing protein 44 (AHRD V1 *--- C3H44_ARATH); contains Interpro domain(s) IPR011011 Zinc finger, FYVE/PHD-typechr03+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G02180No description available.scaffold_1+View
TC0002G07240No description available.scaffold_2+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G31520similar to AT2G18090|PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing proteinch3-6+View
TP5G11090similar to AT3G51120|DNA binding / nucleic acid binding / protein binding / zinc ion bindingch5-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV03G05960name=GSVIVG01024181001;chr3-View
VV04G01110name=GSVIVG01018827001;chr4-View


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Gene id
Species
Description
Chromosome
Strand