Anchorpoints

Gene id
GM01G22260
Organism
Glycine max

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
GM20G32730No description available.Gm20+View
GM02G11060No description available.Gm02-View
GM10G34760No description available.Gm10+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G13900No description available.scaffold_1+View
AL2G17080No description available.scaffold_2+View
AL5G04170No description available.scaffold_5+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G25560TEMPRANILLO 1 (TEM1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: photoperiodism, flowering, ethylene mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to ABI3/VP1 2 (TAIR:AT1G68840.2); Has 6413 Blast hits to 6197 proteins in 270 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 6380; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT. Novel transcriptional regulator involved in ethylene signaling. Promoter bound by EIN3. EDF1 in turn, binds to promoter elements in ethylene responsive genes. AP2/B3 transcription factor family protein1-View
AT1G13260related to ABI3/VP1 1 (RAV1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response DNA binding factor 3 (TAIR:AT3G25730.1); Has 6277 Blast hits to 6015 proteins in 258 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 6251; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). related to ABI3/VP1 1 Encodes an AP2/B3 domain transcription factor which is upregulated in response to low temperature. It contains a B3 DNA binding domain. It has circadian regulation and may function as a negative growth regulator.1+View
AT3G25730ethylene response DNA binding factor 3 ethylene response DNA binding factor 3 (EDF3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: cotyledon, hypocotyl, root, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to ABI3/VP1 1 (TAIR:AT1G13260.1); Has 6965 Blast hits to 6489 proteins in 279 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 6930; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).3+View
AT1G68840related to ABI3/VP1 2 (RAV2); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AP2/B3 transcription factor family protein (TAIR:AT1G25560.1); Has 6747 Blast hits to 6417 proteins in 277 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 6717; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). related to ABI3/VP1 2 Rav2 is part of a complex that has been named `regulator of the (H+)-ATPase of the vacuolar and endosomal membranes' (RAVE)1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G49100No description available.A09-View
BR06G07940No description available.A06-View
BR08G22990No description available.A08-View
BR09G29620No description available.A09-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G24070No description available.Chr5-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00016G05520No description available.CM3.5_scaffold00016+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G12380No description available.scaffold_1+View
CRU_001G23920No description available.scaffold_1+View
CRU_002G14530No description available.scaffold_2+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00071G00370No description available.scaffold00071+View
CS00019G00710No description available.scaffold00019-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0007G17900No description available.scaffold_7-View
EG0002G24950No description available.scaffold_2-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G02370AP2/ERF and B3 domain-containing transcription repressor TEM1 (putative)scf0513158-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G18590No description available.Chr08-View
GR13G08000No description available.Chr13+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD16G002000No description available.16-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06656G00020No description available.scaffold06656-View
ME08359G00500No description available.scaffold08359-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G053920AP2/ERF and B3 domain transcription factorchr5+View
MT1G093600AP2/ERF and B3 domain transcription factorchr1-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G31590No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G12920No description available.Chr10-View
PT08G11710No description available.Chr08+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29738G00510No description available.29738+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G009790Transcription factor (AHRD V1 *-** D6MKM9_9ASPA)%3B contains Interpro domain(s) IPR003340 Transcriptional factor B3ch05-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST05G007520Ethylene-responsive transcription factor 4 (AHRD V1 *-** ERF78_ARATH); contains Interpro domain(s) IPR003340 Transcriptional factor B3chr05+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G35830No description available.scaffold_2-View
TC0004G14420No description available.scaffold_4-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G11770similar to AT1G13260|RAV1ch1-1+View
TP5G23950similar to AT1G68840|RAV2 (REGULATOR OF THE ATPASE OF THE VACUOLAR MEMBRANE)ch5-6+View
TP2G14980similar to AT3G25730|AP2 domain-containing transcription factor, putativech2-4+View
TP1G22650similar to AT1G25560|TEM1 (TEMPRANILLO 1)ch1-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G08180name=GSVIVG01011947001;chr1+View


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Gene id
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Description
Chromosome
Strand