Anchorpoints

Gene id
FV3G12810
Organism
Fragaria vesca

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
FV6G21750Squamosa promoter-binding-like protein 4 (similar to)LG6+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G33810squamosa promoter binding protein-like 3 (SPL3); CONTAINS InterPro DOMAIN/s: Squamosa promoter-binding protein (InterPro:IPR017238), Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter-binding protein-like 12 (TAIR:AT3G60030.1); Has 874 Blast hits to 869 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 10; Plants - 838; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). squamosa promoter binding protein-like 3 Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It binds DNA, may directly regulate AP1, and is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3'UTR.2+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G23210No description available.Chr1+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00001G07350No description available.CM3.5_scaffold00001+View
CM00007G02960No description available.CM3.5_scaffold00007-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G14980No description available.scaffold_4+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00007G00140No description available.scaffold00007+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0005G24590No description available.scaffold_5-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM15G08270No description available.Gm15+View
GM13G31090No description available.Gm13-View
GM16G05895No description available.Gm16+View
GM07G31880No description available.Gm07+View
GM13G24590No description available.Gm13-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ6G026720No description available.chr6-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME04851G00250No description available.scaffold04851+View
ME02307G00400No description available.scaffold02307-View
ME04667G00080No description available.scaffold04667-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G088555squamosa promoter-binding-like proteinchr4-View
MT2G014200squamosa promoter-binding-like proteinchr2+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G04750No description available.scaffold_4+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G13880No description available.Chr07-View
PT04G04670No description available.Chr04+View
PT11G05590No description available.Chr11+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29983G00560No description available.29983+View
RC30190G00320No description available.30190-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G077920Squamosa promoter binding-like protein (AHRD V1 ***- Q0PY35_SOLLC)%3B contains Interpro domain(s) IPR004333 Transcription factor%2C SBP-boxch02-View
SL10G009080Squamosa promoter binding-like protein (AHRD V1 ***- Q0PY35_SOLLC)%3B contains Interpro domain(s) IPR017238 Squamosa promoter-binding proteinch10+View
SL07G053810Squamosa promoter binding-like protein (AHRD V1 ***- Q52UU1_9ROSI)%3B contains Interpro domain(s) IPR004333 Transcription factor%2C SBP-boxch07-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST07G021440Squamosa promoter binding-like protein (AHRD V1 ***- Q52UU1_BETPL); contains Interpro domain(s) IPR017238 Squamosa promoter-binding proteinchr07+View
ST10G009340Squamosa promoter binding-like protein (AHRD V1 ***- Q0PY35_SOLLC); contains Interpro domain(s) IPR017238 Squamosa promoter-binding proteinchr10-View
ST02G020810Squamosa promoter binding-like protein (AHRD V1 ***- Q0PY35_SOLLC); contains Interpro domain(s) IPR004333 Transcription factor, SBP-boxchr02-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G17780No description available.scaffold_2+View
TC0006G17960No description available.scaffold_6-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G16200similar to AT2G33810|SPL3 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 3)ch4-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV12G01810name=GSVIVG01020578001;chr12-View
VV19G02630name=GSVIVG01014302001;chr19-View
VV10G01210name=GSVIVG01021087001;chr10+View


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Gene id
Species
Description
Chromosome
Strand