Anchorpoints
- Gene id
- FV3G12810
- Organism
- Fragaria vesca
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV6G21750 | Squamosa promoter-binding-like protein 4 (similar to) | LG6 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G33810 | squamosa promoter binding protein-like 3 (SPL3); CONTAINS InterPro DOMAIN/s: Squamosa promoter-binding protein (InterPro:IPR017238), Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter-binding protein-like 12 (TAIR:AT3G60030.1); Has 874 Blast hits to 869 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 10; Plants - 838; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). squamosa promoter binding protein-like 3 Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It binds DNA, may directly regulate AP1, and is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3'UTR. | 2 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL01G23210 | No description available. | Chr1 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00001G07350 | No description available. | CM3.5_scaffold00001 | + | View |
CM00007G02960 | No description available. | CM3.5_scaffold00007 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_004G14980 | No description available. | scaffold_4 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00007G00140 | No description available. | scaffold00007 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0005G24590 | No description available. | scaffold_5 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM15G08270 | No description available. | Gm15 | + | View |
GM13G31090 | No description available. | Gm13 | - | View |
GM16G05895 | No description available. | Gm16 | + | View |
GM07G31880 | No description available. | Gm07 | + | View |
GM13G24590 | No description available. | Gm13 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ6G026720 | No description available. | chr6 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME04851G00250 | No description available. | scaffold04851 | + | View |
ME02307G00400 | No description available. | scaffold02307 | - | View |
ME04667G00080 | No description available. | scaffold04667 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT4G088555 | squamosa promoter-binding-like protein | chr4 | - | View |
MT2G014200 | squamosa promoter-binding-like protein | chr2 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_004G04750 | No description available. | scaffold_4 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT07G13880 | No description available. | Chr07 | - | View |
PT04G04670 | No description available. | Chr04 | + | View |
PT11G05590 | No description available. | Chr11 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29983G00560 | No description available. | 29983 | + | View |
RC30190G00320 | No description available. | 30190 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL02G077920 | Squamosa promoter binding-like protein (AHRD V1 ***- Q0PY35_SOLLC)%3B contains Interpro domain(s) IPR004333 Transcription factor%2C SBP-box | ch02 | - | View |
SL10G009080 | Squamosa promoter binding-like protein (AHRD V1 ***- Q0PY35_SOLLC)%3B contains Interpro domain(s) IPR017238 Squamosa promoter-binding protein | ch10 | + | View |
SL07G053810 | Squamosa promoter binding-like protein (AHRD V1 ***- Q52UU1_9ROSI)%3B contains Interpro domain(s) IPR004333 Transcription factor%2C SBP-box | ch07 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST07G021440 | Squamosa promoter binding-like protein (AHRD V1 ***- Q52UU1_BETPL); contains Interpro domain(s) IPR017238 Squamosa promoter-binding protein | chr07 | + | View |
ST10G009340 | Squamosa promoter binding-like protein (AHRD V1 ***- Q0PY35_SOLLC); contains Interpro domain(s) IPR017238 Squamosa promoter-binding protein | chr10 | - | View |
ST02G020810 | Squamosa promoter binding-like protein (AHRD V1 ***- Q0PY35_SOLLC); contains Interpro domain(s) IPR004333 Transcription factor, SBP-box | chr02 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0002G17780 | No description available. | scaffold_2 | + | View |
TC0006G17960 | No description available. | scaffold_6 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP4G16200 | similar to AT2G33810|SPL3 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 3) | ch4-6 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV12G01810 | name=GSVIVG01020578001; | chr12 | - | View |
VV19G02630 | name=GSVIVG01014302001; | chr19 | - | View |
VV10G01210 | name=GSVIVG01021087001; | chr10 | + | View |