Anchorpoints

Gene id
EG0011G04780
Organism
Eucalyptus grandis

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL5G18940No description available.scaffold_5-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G62100indole-3-acetic acid inducible 30 Encodes a member of the Aux/IAA family of proteins implicated in auxin signaling. IAA30 lacks the conserved degron (domain II) found in many family members. IAA30 transcripts are induced by auxin treatment and accumulate preferentially in the quiescent center cells of the root meristem. Overexpression of IAA30 leads to defects in gravitropism, root development, root meristem maintenance, and cotyledon vascular development. Target of LEC2 and AGL15. Promotes somatyic embryogenesis. indole-3-acetic acid inducible 30 (IAA30); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: gravitropism, response to auxin stimulus, response to cyclopentenone, somatic embryogenesis, root development; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 20 (TAIR:AT2G46990.1); Has 1798 Blast hits to 1798 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1797; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).3+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00057G00230No description available.supercontig_57-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G27430No description available.scaffold_5+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00001G05690No description available.scaffold00001+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM19G40970No description available.Gm19-View
GM02G01010No description available.Gm02+View
GM02G38260No description available.Gm02+View
GM10G27881No description available.Gm10-View
GM03G38370No description available.Gm03-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G11770No description available.Chr07-View
GR04G14750No description available.Chr04-View
GR01G14810No description available.Chr01-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G069810No description available.chr1+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME00080G00560No description available.scaffold00080-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G085750auxin-responsive AUX/IAA family proteinchr1+View
MT7G110790auxin-responsive AUX/IAA family proteinchr7-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_010G00170No description available.scaffold_10+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT14G11170No description available.Chr14+View
PT02G18640No description available.Chr02+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30076G01090No description available.30076+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G32410No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G01270similar to AT3G62100|IAA30 (INDOLE-3-ACETIC ACID INDUCIBLE 30)ch5-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G10280name=GSVIVG01028242001;chr7+View


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Gene id
Species
Description
Chromosome
Strand