Anchorpoints

Gene id
EG0002G22810
Organism
Eucalyptus grandis

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G24270No description available.scaffold_4+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G38080IRREGULAR XYLEM 12 (IRX12); FUNCTIONS IN: laccase activity; INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 10 (TAIR:AT5G01190.1); Has 9472 Blast hits to 8326 proteins in 1422 species: Archae - 45; Bacteria - 3703; Metazoa - 467; Fungi - 3359; Plants - 1600; Viruses - 0; Other Eukaryotes - 298 (source: NCBI BLink). LAC4 appears to have laccase activity based on enzyme assays performed using lac4 mutants. These mutants also have reduced levels of lignin. LAC4 is expressed in vascular bundles and fibers and likely contributes to lignin biosynthesis, and hence cell wall biosynthesis, there. lac4/irx12 mutants have a mild irregular xylem phenotype. Laccase/Diphenol oxidase family protein2+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR04G22770No description available.A04+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV7G05440No description available.Bvchr7.sca021-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL10G19770No description available.Chr10+View
CL04G07190No description available.Chr4-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00011G01060No description available.CM3.5_scaffold00011-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00056G01000No description available.supercontig_56+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G19440No description available.scaffold_4+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00145G00080No description available.scaffold00145+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G11060Laccase-4, Precursor (putative)LG6-View
FV7G28870Laccase-22, Precursor (putative)LG7+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM18G42520No description available.Gm18+View
GM02G38990No description available.Gm02+View
GM01G27710No description available.Gm01+View
GM14G37040No description available.Gm14+View
GM03G14450No description available.Gm03-View
GM14G06760No description available.Gm14-View
GM07G17646No description available.Gm07+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR02G26150No description available.Chr02+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03651G00100No description available.scaffold03651-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G015120laccase/diphenol oxidase family proteinchr4+View
MT5G081790laccase/diphenol oxidase family proteinchr5+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G27850No description available.scaffold_6+View
PPE_006G00620No description available.scaffold_6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT16G11200No description available.Chr16+View
PT10G19310No description available.Chr10-View
PT09G04250No description available.Chr09+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29751G00010No description available.29751+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G011960Laccase (AHRD V1 ***- O24042_LIRTU)%3B contains Interpro domain(s) IPR017761 Laccasech09+View
SL10G085090Laccase 1a (AHRD V1 **** B9IG56_POPTR)%3B contains Interpro domain(s) IPR017761 Laccasech10+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST10G023710Laccase 1a (AHRD V1 **** B9IG56_POPTR); contains Interpro domain(s) IPR017761 Laccasechr10-View
ST09G011640Laccase 1a (AHRD V1 ***- B9IG56_POPTR); contains Interpro domain(s) IPR017761 Laccasechr09-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0005G02100No description available.scaffold_5-View
TC0009G30120No description available.scaffold_9-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G20400similar to AT2G38080|IRX12 (IRREGULAR XYLEM 12)ch4-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G13250name=GSVIVG01034003001;chr8+View
VV06G02270name=GSVIVG01024795001;chr6+View


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Gene id
Species
Description
Chromosome
Strand