Anchorpoints

Gene id
CS00116G00290
Organism
Citrus sinensis

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CS00020G01030No description available.scaffold00020-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G37570No description available.scaffold_7-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G40390Raffinose synthase family protein seed imbibition 1-like (SIP1); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, galactinol-sucrose galactosyltransferase activity; INVOLVED IN: mannitol biosynthetic process, raffinose family oligosaccharide biosynthetic process, response to water deprivation, sucrose biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Raffinose synthase (InterPro:IPR008811); BEST Arabidopsis thaliana protein match is: Raffinose synthase family protein (TAIR:AT5G20250.4); Has 508 Blast hits to 470 proteins in 135 species: Archae - 27; Bacteria - 74; Metazoa - 0; Fungi - 82; Plants - 317; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). Encodes a protein which might be involved in the formation of verbascose. A T-DNA insertion mutant was shown to have a decreased amount of verbascose (as well as mannitol) whereas the levels of raffinose and stachyose remained unchanged.5+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR04G09790No description available.A04+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL10G12120No description available.Chr10-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00001G03870No description available.CM3.5_scaffold00001+View
CM00011G09300No description available.CM3.5_scaffold00011+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00108G00510No description available.supercontig_108+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G33920No description available.scaffold_7-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0009G14740No description available.scaffold_9-View
EG0010G19380No description available.scaffold_10+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G39570Probable galactinol--sucrose galactosyltransferase 5 (similar to)scf0513124-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM05G08950No description available.Gm05-View
GM19G00441No description available.Gm19+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR06G03290No description available.Chr06-View
GR12G06350No description available.Chr12+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G014780No description available.chr2+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD17G002270No description available.17-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME05335G00660No description available.scaffold05335+View
ME12794G00710No description available.scaffold12794-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G077280galactinol-raffinose galactosyltransferasechr3-View
MT4G105250raffinose synthase or seed inhibition proteinchr4-View
MT6G004880raffinose synthase or seed inhibition proteinchr6+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS01G07530uncharacterized glycosyltransferase, putative, expressed Galactinol--sucrose galactosyltransferase1-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G17490No description available.scaffold_5-View
PPE_003G26710No description available.scaffold_3+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT15G08170No description available.Chr15+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29933G00190No description available.29933-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G086530Alpha-galactosidase (AHRD V1 **-- C0NUM4_AJECG)%3B contains Interpro domain(s) IPR008811 Raffinose synthasech02-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G025700Alpha-galactosidase (AHRD V1 *--- D6ZX00_BIFLJ); contains Interpro domain(s) IPR008811 Raffinose synthasechr03+View
ST02G036380Alpha-galactosidase (AHRD V1 *--- C0NUM4_AJECG); contains Interpro domain(s) IPR008811 Raffinose synthasechr02+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G01520No description available.scaffold_4+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G01520No description available.ch7-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV14G11200name=GSVIVG01032425001;chr14-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM03G03770stachyose synthase3+View


Download

Gene id
Species
Description
Chromosome
Strand