Anchorpoints
- Gene id
- CS00116G00290
- Organism
- Citrus sinensis
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00020G01030 | No description available. | scaffold00020 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL7G37570 | No description available. | scaffold_7 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G40390 | Raffinose synthase family protein seed imbibition 1-like (SIP1); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, galactinol-sucrose galactosyltransferase activity; INVOLVED IN: mannitol biosynthetic process, raffinose family oligosaccharide biosynthetic process, response to water deprivation, sucrose biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Raffinose synthase (InterPro:IPR008811); BEST Arabidopsis thaliana protein match is: Raffinose synthase family protein (TAIR:AT5G20250.4); Has 508 Blast hits to 470 proteins in 135 species: Archae - 27; Bacteria - 74; Metazoa - 0; Fungi - 82; Plants - 317; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). Encodes a protein which might be involved in the formation of verbascose. A T-DNA insertion mutant was shown to have a decreased amount of verbascose (as well as mannitol) whereas the levels of raffinose and stachyose remained unchanged. | 5 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR04G09790 | No description available. | A04 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL10G12120 | No description available. | Chr10 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00001G03870 | No description available. | CM3.5_scaffold00001 | + | View |
CM00011G09300 | No description available. | CM3.5_scaffold00011 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00108G00510 | No description available. | supercontig_108 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_007G33920 | No description available. | scaffold_7 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0009G14740 | No description available. | scaffold_9 | - | View |
EG0010G19380 | No description available. | scaffold_10 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV0G39570 | Probable galactinol--sucrose galactosyltransferase 5 (similar to) | scf0513124 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM05G08950 | No description available. | Gm05 | - | View |
GM19G00441 | No description available. | Gm19 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR06G03290 | No description available. | Chr06 | - | View |
GR12G06350 | No description available. | Chr12 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ2G014780 | No description available. | chr2 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD17G002270 | No description available. | 17 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME05335G00660 | No description available. | scaffold05335 | + | View |
ME12794G00710 | No description available. | scaffold12794 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT3G077280 | galactinol-raffinose galactosyltransferase | chr3 | - | View |
MT4G105250 | raffinose synthase or seed inhibition protein | chr4 | - | View |
MT6G004880 | raffinose synthase or seed inhibition protein | chr6 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS01G07530 | uncharacterized glycosyltransferase, putative, expressed Galactinol--sucrose galactosyltransferase | 1 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_005G17490 | No description available. | scaffold_5 | - | View |
PPE_003G26710 | No description available. | scaffold_3 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT15G08170 | No description available. | Chr15 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29933G00190 | No description available. | 29933 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL02G086530 | Alpha-galactosidase (AHRD V1 **-- C0NUM4_AJECG)%3B contains Interpro domain(s) IPR008811 Raffinose synthase | ch02 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST03G025700 | Alpha-galactosidase (AHRD V1 *--- D6ZX00_BIFLJ); contains Interpro domain(s) IPR008811 Raffinose synthase | chr03 | + | View |
ST02G036380 | Alpha-galactosidase (AHRD V1 *--- C0NUM4_AJECG); contains Interpro domain(s) IPR008811 Raffinose synthase | chr02 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0004G01520 | No description available. | scaffold_4 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP7G01520 | No description available. | ch7-1 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV14G11200 | name=GSVIVG01032425001; | chr14 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM03G03770 | stachyose synthase | 3 | + | View |