Anchorpoints

Gene id
CS00096G00340
Organism
Citrus sinensis

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G47140No description available.scaffold_1+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G16140Encodes subunit H of photosystem I reaction center subunit VI. photosystem I subunit H-1 (PSAH-1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast thylakoid membrane, chloroplast, photosystem I reaction center; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit VI (InterPro:IPR004928); BEST Arabidopsis thaliana protein match is: photosystem I subunit H2 (TAIR:AT1G52230.1); Has 102 Blast hits to 102 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). photosystem I subunit H-13-View
AT1G52230photosystem I subunit H2 (PSAH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit VI (InterPro:IPR004928); BEST Arabidopsis thaliana protein match is: photosystem I subunit H-1 (TAIR:AT3G16140.1); Has 102 Blast hits to 102 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). photosystem I subunit H2 Phosphorylation of this protein is dependent on calcium.1+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00109G00520No description available.scaffold00109-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G01940Photosystem I reaction center subunit VI, chloroplasticA06-View
BR01G32790No description available.A01+View
BR05G27050No description available.A05+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV9G16920No description available.Bvchr9.sca026-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL07G13060No description available.Chr7+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00018G02020No description available.CM3.5_scaffold00018-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G39260No description available.scaffold_1+View
CRU_003G15110No description available.scaffold_3-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G25510No description available.scaffold_6-View
EG0010G25200No description available.scaffold_10+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G15950Photosystem I reaction center subunit VI, chloroplastic (PSI-H), Precursor (similar to)LG6+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM08G21900No description available.Gm08+View
GM07G02240No description available.Gm07+View
GM15G01940No description available.Gm15-View
GM13G43370No description available.Gm13+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G13490No description available.Chr09-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD09G018610No description available.9+View
MD17G015080No description available.17+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07351G00590No description available.scaffold07351-View
ME10797G00330No description available.scaffold10797+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G101820photosystem I reaction center subunit VIchr2+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G05340No description available.scaffold_3+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G05250No description available.Chr03+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30146G01450No description available.30146+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G066640Photosystem I reaction center subunit VI-1%2C chloroplastic (AHRD V1 ***- PSAH1_ARATH)%3B contains Interpro domain(s) IPR004928 Photosystem I reaction centre subunit VIch06+View
SL12G044280Photosystem I reaction center subunit VI%2C chloroplastic (AHRD V1 ***- PSAH_SPIOL)%3B contains Interpro domain(s) IPR004928 Photosystem I reaction centre subunit VIch12-View
SL03G120640Photosystem I reaction center subunit VI-1%2C chloroplastic (AHRD V1 ***- PSAH1_ARATH)%3B contains Interpro domain(s) IPR004928 Photosystem I reaction centre subunit VIch03+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G023130Photosystem I reaction center subunit VI-2, chloroplastic (AHRD V1 ***- PSAH2_ARATH); contains Interpro domain(s) IPR004928 Photosystem I reaction centre subunit VIchr06+View
ST12G022070Photosystem I reaction center subunit VI, chloroplastic (AHRD V1 ***- PSAH_SPIOL); contains Interpro domain(s) IPR004928 Photosystem I reaction centre subunit VIchr12-View
ST03G036350Photosystem I reaction center subunit VI, chloroplastic (AHRD V1 ***- PSAH_BRARA); contains Interpro domain(s) IPR004928 Photosystem I reaction centre subunit VIchr03-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0006G09220No description available.scaffold_6-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G14500similar to AT3G16140|PSAH-1 (photosystem I subunit H-1)ch3-1-View
TP1G38770similar to AT1G52230|PSAH2 (PHOTOSYSTEM I SUBUNIT H2)ch1-2+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV09G04980name=GSVIVG01017071001;chr9-View


Download

Gene id
Species
Description
Chromosome
Strand