Anchorpoints

Gene id
CS00065G00740
Organism
Citrus sinensis

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G06770No description available.scaffold_7+View
AL3G21010No description available.scaffold_3+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G34230Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use sinapyl, caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates. cinnamyl alcohol dehydrogenase 5 cinnamyl alcohol dehydrogenase 5 (CAD5); CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding alcohol dehydrogenase family protein (TAIR:AT3G19450.1); Has 41203 Blast hits to 41171 proteins in 3032 species: Archae - 764; Bacteria - 27799; Metazoa - 1384; Fungi - 3121; Plants - 2810; Viruses - 3; Other Eukaryotes - 5322 (source: NCBI BLink).4-View
AT3G19450GroES-like zinc-binding alcohol dehydrogenase family protein Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates. ATCAD4; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase 5 (TAIR:AT4G34230.1); Has 40533 Blast hits to 40509 proteins in 3018 species: Archae - 756; Bacteria - 27152; Metazoa - 1406; Fungi - 3053; Plants - 2651; Viruses - 3; Other Eukaryotes - 5512 (source: NCBI BLink).3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G54080No description available.A03-View
BR05G24160No description available.A05-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV9G19640No description available.Bvchr9.sca026+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G06440No description available.Chr2-View
CL05G11580No description available.Chr5-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00034G00970No description available.CM3.5_scaffold00034+View
CM00038G01870No description available.CM3.5_scaffold00038-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00106G00860No description available.supercontig_106-View
CP00006G00920No description available.supercontig_6-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G18390No description available.scaffold_3+View
CRU_007G05800No description available.scaffold_7+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0007G09860No description available.scaffold_7+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G38890Probable cinnamyl alcohol dehydrogenase 1 (CAD 1) (similar to)LG6-View
FV1G17470Probable cinnamyl alcohol dehydrogenase (CAD) (similar to)LG1-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM20G26440No description available.Gm20+View
GM10G40870No description available.Gm10-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G02280No description available.Chr08+View
GR07G21830No description available.Chr07+View
GR05G23480No description available.Chr05+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ5G037090No description available.chr5+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD05G022870No description available.5+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G107425cinnamyl alcohol dehydrogenase-like proteinchr1+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_008G15380No description available.scaffold_8-View
PPE_006G23770No description available.scaffold_6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT09G09580No description available.Chr09+View
PT07G04920No description available.Chr07+View
PT01G30000No description available.Chr01+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29970G00180No description available.29970+View
RC29801G00380No description available.29801+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G107590Cinnamyl alcohol dehydrogenase (AHRD V1 **** C1IC55_GOSHI)%3B contains Interpro domain(s) IPR002085 Alcohol dehydrogenase superfamily%2C zinc-containingch01+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G044710Cinnamyl alcohol dehydrogenase (AHRD V1 ***- B5AR58_LEUGL); contains Interpro domain(s) IPR002085 Alcohol dehydrogenase superfamily, zinc-containingchr01+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G06080No description available.scaffold_1+View
TC0002G10400No description available.scaffold_2-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G17510similar to AT3G19450|ATCAD4ch3-1+View
TP7G32010similar to AT4G34230|ATCAD5 (CINNAMYL ALCOHOL DEHYDROGENASE 5)ch7-5-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV03G00470name=GSVIVG01003153001;chr3-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM05G21960Probable cinnamyl alcohol dehydrogenase Probable cinnamyl alcohol dehydrogenase (CAD)(EC 1.1.1.195)(Brown-midrib 1 protein)5-View


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Description
Chromosome
Strand