Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- CS00029G00560
- Organism
- Citrus sinensis
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00055G00090 | No description available. | scaffold00055 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL3G28490 | No description available. | scaffold_3 | + | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G24800 | proteolysis 1 (PRT1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT1G18660.1); Has 4154 Blast hits to 3358 proteins in 276 species: Archae - 0; Bacteria - 0; Metazoa - 2882; Fungi - 341; Plants - 509; Viruses - 3; Other Eukaryotes - 419 (source: NCBI BLink). proteolysis 1 Contains two ring finger domains and one ZZ domain. Week similarity to yeast Rad18p. Putative component of the N-end rule pathway (ubiquitin-dependent proteolysis). | 3 | + | View |
Amborella trichopoda
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ATR_00067G01710 | No description available. | scaffold00067 | + | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR03G38130 | No description available. | A03 | + | View |
| BR07G03750 | No description available. | A07 | - | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV7G14670 | No description available. | Bvchr7.sca019 | + | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL09G08530 | No description available. | Chr9 | - | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00046G00240 | No description available. | CM3.5_scaffold00046 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00008G01530 | No description available. | supercontig_8 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_003G24190 | No description available. | scaffold_3 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0011G17920 | No description available. | scaffold_11 | - | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV2G15070 | E3 ubiquitin-protein ligase PRT1 (probable) | LG2 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM08G46900 | No description available. | Gm08 | - | View |
| GM18G36930 | No description available. | Gm18 | + | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR05G13110 | No description available. | Chr05 | - | View |
| GR06G22160 | No description available. | Chr06 | + | View |
| GR07G15410 | No description available. | Chr07 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD09G015150 | No description available. | 9 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME06825G00010 | No description available. | scaffold06825 | - | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT7G058430 | E3 ubiquitin-protein ligase PRT1-like protein | chr7 | - | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_008G21870 | No description available. | scaffold_8 | - | View |
| PPE_001G00590 | No description available. | scaffold_1 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT01G04930 | No description available. | Chr01 | - | View |
| PT02G24190 | No description available. | Chr02 | + | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC29904G00730 | No description available. | 29904 | - | View |
| RC30204G00350 | No description available. | 30204 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL09G091790 | E3 ubiquitin-protein ligase PRT1 (AHRD V1 **-* PRT1_ARATH)%3B contains Interpro domain(s) IPR000433 Zinc finger%2C ZZ-type | ch09 | - | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST09G028300 | E3 ubiquitin-protein ligase PRT1 (AHRD V1 **-* PRT1_ARATH); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr09 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0004G21000 | No description available. | scaffold_4 | - | View |
| TC0001G22160 | No description available. | scaffold_1 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP3G22540 | similar to AT3G24800|PRT1 (PROTEOLYSIS 1) | ch3-2 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV07G12900 | name=GSVIVG01028643001; | chr7 | - | View |