Anchorpoints

Gene id
CS00029G00110
Organism
Citrus sinensis

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G13010No description available.scaffold_7+View
AL3G35730No description available.scaffold_3-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G28750PSA E1 KNOCKOUT (PSAE-1); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to salt stress; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit IV/PsaE (InterPro:IPR003375), Electron transport accessory protein (InterPro:IPR008990); BEST Arabidopsis thaliana protein match is: photosystem I subunit E-2 (TAIR:AT2G20260.1); Has 449 Blast hits to 449 proteins in 133 species: Archae - 0; Bacteria - 180; Metazoa - 5; Fungi - 0; Plants - 90; Viruses - 3; Other Eukaryotes - 171 (source: NCBI BLink). mutant has Decreased effective quantum yield of photosystem II; Pale green plants; Reduced growth rate; Subunit E of Photosystem I Photosystem I reaction centre subunit IV / PsaE protein4-View
AT2G20260photosystem I subunit E-2 photosystem I subunit E-2 (PSAE-2); FUNCTIONS IN: catalytic activity; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, photosystem I reaction center; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit IV/PsaE (InterPro:IPR003375), Electron transport accessory protein (InterPro:IPR008990); BEST Arabidopsis thaliana protein match is: Photosystem I reaction centre subunit IV / PsaE protein (TAIR:AT4G28750.1); Has 441 Blast hits to 441 proteins in 130 species: Archae - 0; Bacteria - 177; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 3; Other Eukaryotes - 171 (source: NCBI BLink). Encodes subunit E of photosystem I.2+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G08390No description available.A01+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV7G00650No description available.Bvchr7.sca014-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00008G02040No description available.supercontig_8+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G11210No description available.scaffold_7+View
CRU_003G33280No description available.scaffold_3+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G07100No description available.scaffold_8+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G10790Photosystem I reaction center subunit IV B isoform 2, Precursor (similar to)LG2-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM13G19170No description available.Gm13-View
GM10G04780No description available.Gm10-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G15150No description available.Chr07-View
GR04G05780No description available.Chr04-View
GR01G23580No description available.Chr01+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD05G014740No description available.5-View
MD10G013120No description available.10+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME11378G00180No description available.scaffold11378+View
ME06825G00410No description available.scaffold06825+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G099390photosystem I reaction center subunit IV Achr7-View
MT1G069235photosystem I reaction center subunit IV Achr1+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_008G22450No description available.scaffold_8+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G25380No description available.Chr02+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30204G00950No description available.30204+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G083680Photosystem I reaction center subunit IV A (AHRD V1 ***- B6TH55_MAIZE)%3B contains Interpro domain(s) IPR008990 Electron transport accessory proteinch06+View
SL09G063130Photosystem I reaction center subunit IV A (AHRD V1 *-*- B6TH55_MAIZE)%3B contains Interpro domain(s) IPR003375 Photosystem I reaction centre subunit IV/PsaEch09+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST09G018400Photosystem I reaction center subunit IV A (AHRD V1 *-*- B6TH55_MAIZE); contains Interpro domain(s) IPR003375 Photosystem I reaction centre subunit IV/PsaEchr09-View
ST06G034140Photosystem I reaction center subunit IV A (AHRD V1 *-*- B6TH55_MAIZE); contains Interpro domain(s) IPR008990 Electron transport accessory proteinchr06+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G24290No description available.scaffold_1+View
TC0005G26460No description available.scaffold_5+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G33490similar to AT2G20260|PSAE-2 (photosystem I subunit E-2)ch3-6+View
TP7G26760similar to AT4G28750|PSAE-1 (PSA E1 KNOCKOUT)ch7-5-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G12090name=GSVIVG01028481001;chr7-View


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Gene id
Species
Description
Chromosome
Strand